RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SLC13A3Q8WWT9 602 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 GATA6Q92908 595 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 PPP2R3CQ969Q6 453 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 NCLNQ969V3 563 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ROPN1LQ96C74 230 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DTD2Q96FN9 168 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 TSC22D3Q99576 134 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ZSCAN5AQ9BUG6 496 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 PRSS16Q9NQE7 514 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 SLC25A37Q9NYZ2 338 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 MARK1Q9P0L2 795 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 STOX2Q9P2F5 926 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 CA5BQ9Y2D0 317 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ST14Q9Y5Y6 855 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 MAGEB17A8MXT2 336 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 C5orf67F2Z3F1 127 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 NUAK1O60285 661 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 EEDO75530 441 aaKnown RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 PGRP06401 933 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 EBLN1P0CF75 366 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 FCARP24071 287 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 HOXA9P31269 272 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 HNF4AP41235 474 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 GRIA2P42262 883 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 ZIK1Q3SY52 487 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 PLD3Q8IV08 490 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 CLECL1Q8IZS7 167 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 HS3ST5Q8IZT8 346 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 DTWD1Q8N5C7 304 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 TMCO5AQ8N6Q1 288 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 DDHD1Q8NEL9 900 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 NEIL2Q969S2 332 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 PPP3R2Q96LZ3 170 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 CGREF1Q99674 301 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 TMEM121BQ9BXQ6 578 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 CARS2Q9HA77 564 aaKnown RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 SLC28A3Q9HAS3 691 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 MRPL40Q9NQ50 206 aaKnown RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 C1orf109Q9NX04 203 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 C6orf203Q9P0P8 240 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 FBXO10Q9UK96 956 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 TRPM6Q9BX84 2022 aa12.21□□□□□ -0.45
LIMK1-201ENST00000336180 HELZP42694 1942 aaKnown RBP12.21□□□□□ -0.45
LIMK1-201ENST00000336180 A0A0G2JN53 185 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 OR6B1O95007 311 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 TGFB1P01137 390 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 KRT6AP02538 564 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 PRNPP04156 253 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 KRT6BP04259 564 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 GNAO1P09471 354 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 SDC1P18827 310 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 IMPA1P29218 277 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 KRT6CP48668 564 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 UBE3AQ05086 875 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 RUNX3Q13761 415 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 DUSP6Q16828 381 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 CACHD1Q5VU97 1274 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 GLYATQ6IB77 296 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 SYCE2Q6PIF2 218 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 EFL1Q7Z2Z2 1120 aaKnown RBP12.21□□□□□ -0.46
LIMK1-201ENST00000336180 ADGRG6Q86SQ4 1221 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 HEATR4Q86WZ0 1026 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 MINDY1Q8N5J2 469 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 FRMD1Q8N878 549 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 OR5AR1Q8NGP9 310 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 IRF2BPLQ9H1B7 796 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 OAZ3Q9UMX2 235 aa12.21□□□□□ -0.46
LIMK1-201ENST00000336180 C15orf38-AP3S2A0A0A6YYH1 394 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 BBIP1A8MTZ0 92 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 FTH1P02794 183 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 NTRK1P04629 796 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 CD72P21854 359 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 PSMB5P28074 263 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 RPS14P62263 151 aaKnown RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 HKDC1Q2TB90 917 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ZBTB49Q6ZSB9 765 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ARPINQ7Z6K5 226 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 MSRB3Q8IXL7 192 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 OFCC1Q8IZS5 231 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 MMP21Q8N119 569 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 MIPOL1Q8TD10 442 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 HIC2Q96JB3 615 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ZBTB18Q99592 522 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 HOPXQ9BPY8 73 aaPredicted RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 DPH2Q9BQC3 489 aaPredicted RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 SGK2Q9HBY8 427 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 HEBP1Q9NRV9 189 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 BTBD3Q9Y2F9 522 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 U3KQV3 271 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 TRBV23OR9-2A0A075B6M9 112 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 RNF103-CHMP3A0A140T963 221 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 TCRBV3S1A0A5B6 114 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms