RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ATG13O75143 517 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 HLA-DPB1P04440 258 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 DNASE1P24855 282 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 HOXD12P35452 270 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CCL23P55773 120 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 RASGEF1BQ0VAM2 473 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 MAD2L1BPQ15013 274 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 IRF2BP1Q8IU81 584 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 SLC30A8Q8IWU4 369 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 DNAJB8Q8NHS0 232 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 ASB15Q8WXK1 588 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 C1orf21Q9H246 121 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 LRRN3Q9H3W5 708 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CLCA3PQ9Y6N3 262 aa9.6□□□□□ -0.87
COL4A6-201ENST00000334504 CYB5AP00167 134 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 IL1BP01584 269 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 CDKN2CP42773 168 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TRMT10BQ6PF06 316 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 STRADAQ7RTN6 431 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 NDRG1Q92597 394 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ADAD1Q96M93 576 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 PHB2Q99623 299 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TP63Q9H3D4 680 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TRIM36Q9NQ86 728 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TEX13DA0A0J9YY54 714 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SH3PXD2BA1X283 911 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 C1QTNF3-AMACRE9PGA6 284 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 MSI1O43347 362 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 OXSR1O95747 527 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 OPN1SWP03999 348 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ERVK-8P63133 956 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 PRR5P85299 388 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SEC23BQ15437 767 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SH3PXD2AQ5TCZ1 1133 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 OR6C4Q8NGE1 309 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 RHBDF1Q96CC6 855 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 CDK15Q96Q40 435 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TMEM184CQ9NVA4 438 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF226Q9NYT6 803 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 FZD4Q9ULV1 537 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ERVK-19Q9WJR5 959 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 LRCH4O75427 683 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ENGP17813 658 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 MMP8P22894 467 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 PIGFQ07326 219 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 FADDQ13158 208 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ATXN7L2Q5T6C5 722 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ADGRG6Q86SQ4 1221 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF557Q8N988 423 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 DCAKDQ8WVC6 231 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 BIRC7Q96CA5 298 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 S100A16Q96FQ6 103 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TAPBPLQ9BX59 468 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 MTFR1LQ9H019 292 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 IKZF4Q9H2S9 585 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 AKTIPQ9H8T0 292 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 POLLQ9UGP5 575 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 PCDHGB1Q9Y5G3 927 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 RAI2Q9Y5P3 530 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 CDC42BPAQ5VT25 1732 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 F5H0A9 414 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SSX4O60224 188 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TCEA1P23193 301 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 PTP4A2Q12974 167 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 YIPF7Q8N8F6 280 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 GPR152Q8TDT2 470 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF317Q96PQ6 595 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TM9SF2Q99805 663 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 NDC1Q9BTX1 674 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 WDR18Q9BV38 432 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SPATC1LQ9H0A9 340 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 MOCS1Q9NZB8 636 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 PCDHGB6Q9Y5F9 930 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TARBP1Q13395 1621 aaKnown RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 AGAP5A6NIR3 686 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 RAB36O95755 333 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SPAM1P38567 509 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 MAP2K3P46734 347 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 JAM2P57087 298 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 ILF3Q12906 894 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 EIPR1Q53HC9 387 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 TSTD2Q5T7W7 516 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SLC2A7Q6PXP3 512 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SLC16A9Q7RTY1 509 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 SLC44A3Q8N4M1 653 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 METTL25Q8N6Q8 603 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 FAXDC2Q96IV6 333 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 GLIS2Q9BZE0 524 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-201ENST00000334504 UCK2Q9BZX2 261 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 OXSMQ9NWU1 459 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 MGAT4CQ9UBM8 478 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 FETUBQ9UGM5 382 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 EBF1Q9UH73 591 aa9.59□□□□□ -0.87
COL4A6-201ENST00000334504 EEF1E1O43324 174 aaKnown RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 RFPL2O75678 378 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 HMGN1P05114 100 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms