RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 UPK1BO75841 260 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ENDOUP21128 410 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CDH11P55287 796 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 HSDL1Q3SXM5 330 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 METTL11BQ5VVY1 283 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 OTOP1Q7RTM1 612 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CCDC24Q8N4L8 307 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GPN2Q9H9Y4 310 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TSPOAP1O95153 1857 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 H2AFB2P0C5Z0 115 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CXCL8P10145 99 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MAOAP21397 527 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 EIF4HQ15056 248 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TEX44Q53QW1 395 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 KCNIP4Q6PIL6 250 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GPAT4Q86UL3 456 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GALNT13Q8IUC8 556 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 C7orf61Q8IZ16 206 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SLC43A3Q8NBI5 491 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 OR8K3Q8NH51 312 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 C1orf216Q8TAB5 229 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ASB13Q8WXK3 278 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FAM83DQ9H4H8 585 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PAQR5Q9NXK6 330 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 HACL1Q9UJ83 578 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 NOP16Q9Y3C1 178 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 H7C417 338 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RBMS1P29558 406 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SPAM1P38567 509 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CRY2Q49AN0 593 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TMBIM1Q969X1 311 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF700Q9H0M5 742 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 COPS7AQ9UBW8 275 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FUOMA2VDF0 154 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 TTC34A8MYJ7 566 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CLDN11O75508 207 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SLC35G6P0C7Q6 338 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 MPSTP25325 297 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CXCR3P49682 368 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 HLCSP50747 726 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 AMHR2Q16671 573 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 TMCO2Q7Z6W1 182 aaPredicted RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 FAM109AQ8N4B1 249 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZSCAN1Q8NBB4 408 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 OR2L8Q8NGY9 312 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SHKBP1Q8TBC3 707 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 DNASE1L2Q92874 299 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SCRN2Q96FV2 425 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CNTNAP3BQ96NU0 1288 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 GLYATL1P3A0A0U1RQE8 302 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 OR2AG2A6NM03 316 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 NOBOXO60393 691 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 LYPLA2O95372 231 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 MC4RP32245 332 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ATP5C1P36542 298 aaKnown RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 GRK6P43250 576 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 NR4A2P43354 598 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 HLFQ16534 295 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF630Q2M218 657 aaPredicted RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 FSTL4Q6MZW2 842 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 FBXL19Q6PCT2 694 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 PIGKQ92643 395 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 KXD1Q9BQD3 176 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 NANSQ9NR45 359 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 AGO1Q9UL18 857 aaKnown RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 H7C1Q1 480 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 UCHL1P09936 223 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 DNAJB13P59910 316 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 UGT3A2Q3SY77 523 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 HES5Q5TA89 166 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 PIAS4Q8N2W9 510 aaPredicted RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 Q8N402 240 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 OR10G2Q8NGC3 310 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 OR56A1Q8NGH5 318 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 MFSD8Q8NHS3 518 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZFP3Q96NJ6 502 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 COPS8Q99627 209 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 DUSP26Q9BV47 211 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 FAM53CQ9NYF3 392 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ACTR10Q9NZ32 417 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF705EA8MWA4 302 aaPredicted RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 COQ9O75208 318 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 RAB8AP61006 207 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CDK10Q15131 360 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 PRAMEF13Q5VWM6 474 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 LINC00299Q6ZSB3 139 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 PXKQ7Z7A4 578 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF565Q8N9K5 539 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CHST4Q8NCG5 386 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CPT1BQ92523 772 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SNAPC3Q92966 411 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 FAM136AQ96C01 138 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 EIF5A2Q9GZV4 153 aaKnown RBP5.4□□□□□ -1.54
PTPRB-202ENST00000334414 EVA1AQ9H8M9 152 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SNTG2Q9NY99 539 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 MARCH2Q9P0N8 246 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZNRF3Q9ULT6 936 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 PPIEQ9UNP9 301 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms