RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ALKBH4Q9NXW9 302 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 NCOR1O75376 2440 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 IGSF6O95976 241 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 MBP02144 154 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 UROSP10746 265 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 RYKP34925 604 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 PTPN9P43378 593 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 HTRA4P83105 476 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 DPY19L1Q2PZI1 675 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 TMC8Q8IU68 726 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 TMED9Q9BVK6 235 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 KCNK13Q9HB14 408 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 ALX3O95076 343 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 HLA-DPB1P04440 258 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 EEFSECP57772 596 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 RAB8AP61006 207 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 RNASEH2BQ5TBB1 312 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 DRICH1Q6PGQ1 229 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF720Q7Z2F6 126 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 OTUB2Q96DC9 234 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 OMDQ99983 421 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 TARS2Q9BW92 718 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 NUSAP1Q9BXS6 441 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNRF3Q9ULT6 936 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 PCDHGA8Q9Y5G5 932 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 FGF10O15520 208 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 UGT2B10P36537 528 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 DLSTP36957 453 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 KCNJ8Q15842 424 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 BBS12Q6ZW61 710 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 SGTBQ96EQ0 304 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 PCDHGB5Q9Y5G0 923 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 A0A1B0GVM2 712 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 SH3RF1Q7Z6J0 888 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF565Q8N9K5 539 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 GAB3Q8WWW8 586 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 PEX13Q92968 403 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 CNTNAP3BQ96NU0 1288 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 C12orf65Q9H3J6 166 aaKnown RBP10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 NELFAQ9H3P2 528 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 PXMP2Q9NR77 195 aa10.13□□□□□ -0.79
SPTBN1-201ENST00000333896 HMX3A6NHT5 357 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 HTRA2O43464 458 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 XPNPEP2O43895 674 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 IL3P08700 152 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 PUM1Q14671 1186 aaKnown RBP eCLIP10.12□□□□□ -0.792e-6■■■■□ 20.1
SPTBN1-201ENST00000333896 SNAPC3Q92966 411 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 MALSU1Q96EH3 234 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 JSRP1Q96MG2 331 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 TAS2R8Q9NYW2 309 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 AGAP5A6NIR3 686 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 FCER2P06734 321 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 THPOP40225 353 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 MAP3K8P41279 467 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 ZC3HC1Q86WB0 502 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SLC15A4Q8N697 577 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SLC5A7Q9GZV3 580 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 XPNPEP1Q9NQW7 623 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 MINPP1Q9UNW1 487 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 NDUFB10O96000 172 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SLC26A2P50443 739 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 TKTL1P51854 596 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 POM121L1PQ3SYA9 428 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 RALGPS1Q5JS13 557 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 DCST1Q5T197 706 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 GDPGP1Q6ZNW5 385 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 GK5Q6ZS86 529 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 PPCDCQ96CD2 204 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 TCF25Q9BQ70 676 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 NT5DC2Q9H857 520 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 THG1LQ9NWX6 298 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SRRDQ9UH36 339 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 PRAMEF2O60811 474 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 NRG1Q02297 640 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 PRKD1Q15139 912 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 CDNFQ49AH0 187 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 HEBP1Q9NRV9 189 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 NUFIP1Q9UHK0 495 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 HEG1Q9ULI3 1381 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SEPT4O43236 478 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF20P17024 532 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SERPINA4P29622 427 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 ANTXR2P58335 489 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 UBE2UQ5VVX9 321 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 NEPROQ6NW34 567 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 RALGPS2Q86X27 583 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 SPTBN2O15020 2390 aa10.12□□□□□ -0.79
SPTBN1-201ENST00000333896 MYO7BQ6PIF6 2116 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms