RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ASNA1O43681 348 aa23■■□□□ 1.27
TSKU-201ENST00000333090 WBP4O75554 376 aaKnown RBP23■■□□□ 1.27
TSKU-201ENST00000333090 LRATO95237 230 aa23■■□□□ 1.27
TSKU-201ENST00000333090 GTF2E2P29084 291 aaKnown RBP23■■□□□ 1.27
TSKU-201ENST00000333090 TWF1Q12792 350 aa23■■□□□ 1.27
TSKU-201ENST00000333090 SMU1Q2TAY7 513 aa23■■□□□ 1.27
TSKU-201ENST00000333090 PROX2Q3B8N5 592 aa23■■□□□ 1.27
TSKU-201ENST00000333090 PRSS36Q5K4E3 855 aa23■■□□□ 1.27
TSKU-201ENST00000333090 CST9Q5W186 159 aa23■■□□□ 1.27
TSKU-201ENST00000333090 CLIP4Q8N3C7 705 aa23■■□□□ 1.27
TSKU-201ENST00000333090 CLDN19Q8N6F1 224 aa23■■□□□ 1.27
TSKU-201ENST00000333090 KIAA1958Q8N8K9 716 aa23■■□□□ 1.27
TSKU-201ENST00000333090 LKAAEAR1Q8TD35 194 aa23■■□□□ 1.27
TSKU-201ENST00000333090 CLPBQ9H078 707 aa23■■□□□ 1.27
TSKU-201ENST00000333090 ANKHQ9HCJ1 492 aa23■■□□□ 1.27
TSKU-201ENST00000333090 GPRC5BQ9NZH0 403 aa23■■□□□ 1.27
TSKU-201ENST00000333090 FABP3P05413 133 aa23■■□□□ 1.27
TSKU-201ENST00000333090 SPNP16150 400 aa23■■□□□ 1.27
TSKU-201ENST00000333090 THPOP40225 353 aa23■■□□□ 1.27
TSKU-201ENST00000333090 PPP3CCP48454 512 aa23■■□□□ 1.27
TSKU-201ENST00000333090 RPP38P78345 283 aaKnown RBP23■■□□□ 1.27
TSKU-201ENST00000333090 ZNF181Q2M3W8 571 aa23■■□□□ 1.27
TSKU-201ENST00000333090 LRIT3Q3SXY7 679 aa23■■□□□ 1.27
TSKU-201ENST00000333090 FAM171A1Q5VUB5 890 aa23■■□□□ 1.27
TSKU-201ENST00000333090 ZCCHC8Q6NZY4 707 aaKnown RBP23■■□□□ 1.27
TSKU-201ENST00000333090 MBOAT1Q6ZNC8 495 aa23■■□□□ 1.27
TSKU-201ENST00000333090 CHCHD4Q8N4Q1 142 aa23■■□□□ 1.27
TSKU-201ENST00000333090 ABCG8Q9H221 673 aa23■■□□□ 1.27
TSKU-201ENST00000333090 AASDHPPTQ9NRN7 309 aa23■■□□□ 1.27
TSKU-201ENST00000333090 PRG3Q9Y2Y8 225 aaPredicted RBP23■■□□□ 1.27
TSKU-201ENST00000333090 OARD1Q9Y530 152 aa23■■□□□ 1.27
TSKU-201ENST00000333090 GOLGA8CPA6NN73 597 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 FKBP9O95302 570 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 RGS4P49798 205 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 IPCEF1Q8WWN9 437 aaPredicted RBP22.99■■□□□ 1.27
TSKU-201ENST00000333090 ACPTQ9BZG2 426 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 METTL15A6NJ78 407 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 SAGE2PA6NJ88 616 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 RFXANKO14593 260 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 PRAMEF12O95522 483 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 PTPN6P29350 595 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 C21orf33P30042 268 aaPredicted RBP22.99■■□□□ 1.27
TSKU-201ENST00000333090 TUBA1BP68363 451 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 CACNG1Q06432 222 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 TUBA1AQ71U36 451 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 SYTL1Q8IYJ3 562 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 DNAJB8Q8NHS0 232 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 PROX1Q92786 737 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 DNASE1L2Q92874 299 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 NACA2Q9H009 215 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 MAN2B2Q9Y2E5 1009 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 IFT52Q9Y366 437 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 TESMINQ9Y4I5 508 aa22.99■■□□□ 1.27
TSKU-201ENST00000333090 PABPN1LA6NDY0 278 aaKnown RBP22.98■■□□□ 1.27
TSKU-201ENST00000333090 KDELR3O43731 214 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 OAZ2O95190 189 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 EPB42P16452 691 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 EFNA1P20827 205 aaPredicted RBP22.98■■□□□ 1.27
TSKU-201ENST00000333090 TACR1P25103 407 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 RING1Q06587 406 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 FAM151BQ6UXP7 276 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 P3H2Q8IVL5 708 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 POP5Q969H6 163 aaKnown RBP22.98■■□□□ 1.27
TSKU-201ENST00000333090 TBC1D20Q96BZ9 403 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 COPS4Q9BT78 406 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 HOXD1Q9GZZ0 328 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 TPK1Q9H3S4 243 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 AMBNQ9NP70 447 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 ITM2CQ9NQX7 267 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 ASIC5Q9NY37 505 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 IL37Q9NZH6 218 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 PCDHB1Q9Y5F3 818 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 H7C0S8 307 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 WDR47O94967 919 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 GADD45AP24522 165 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 UBE2UQ5VVX9 321 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 DESI1Q6ICB0 168 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 APH1BQ8WW43 257 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 CEP295NLQ96MC4 621 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 GPR63Q9BZJ6 419 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 SIRT5Q9NXA8 310 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 RNF6Q9Y252 685 aa22.98■■□□□ 1.27
TSKU-201ENST00000333090 FAM47E-STBD1D6RA91 191 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 TAF4O00268 1085 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 SLC25A14O95258 325 aaPredicted RBP22.97■■□□□ 1.27
TSKU-201ENST00000333090 EBLN1P0CF75 366 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 PAX3P23760 479 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 CLDN8P56748 225 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 NPRL3Q12980 569 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 ARHGEF7Q14155 803 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 LINGO4Q6UY18 593 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 UTS2BQ765I0 119 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 RASAL3Q86YV0 1011 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 ENTHD1Q8IYW4 607 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 SEPT5Q99719 369 aaPredicted RBP22.97■■□□□ 1.27
TSKU-201ENST00000333090 ARHGAP39Q9C0H5 1083 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 TRPS1Q9UHF7 1281 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 PPT2Q9UMR5 302 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 NOD1Q9Y239 953 aa22.97■■□□□ 1.27
TSKU-201ENST00000333090 PLXNA3P51805 1871 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms