RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 ACDQ96AP0 544 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 CNDP2Q96KP4 475 aaKnown RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ZNF778Q96MU6 729 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ZDHHC6Q9H6R6 413 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 NFKBIL1Q9UBC1 381 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 NCKAP1Q9Y2A7 1128 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 RNF11Q9Y3C5 154 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 CSF2P04141 144 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 MATN1P21941 496 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ERP29P30040 261 aaKnown RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 SETMARQ53H47 684 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ZFAND4Q86XD8 727 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 SLC30A8Q8IWU4 369 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 OR7D4Q8NG98 312 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 GEMIN6Q8WXD5 167 aaKnown RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 C12orf42Q96LP6 360 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 FCRL4Q96PJ5 515 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 POLR3BQ9NW08 1133 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 CPA4Q9UI42 421 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 PTGDR2Q9Y5Y4 395 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 REM1O75628 298 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 FGBP02675 491 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 C8GP07360 202 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 EFNA1P20827 205 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 NR4A2P43354 598 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 CLCNKBP51801 687 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 TAF10Q12962 218 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 MTAPQ13126 283 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 TMEM44Q2T9K0 475 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ZNF697Q5TEC3 545 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 ZDHHC20Q5W0Z9 365 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 CAPN13Q6MZZ7 669 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 PHACTR4Q8IZ21 702 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 UCKL1Q9NWZ5 548 aa15.53■□□□□ 0.08
SLIT3-201ENST00000332966 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
SLIT3-201ENST00000332966 FAM47E-STBD1D6RA91 191 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 HEPACAMQ14CZ8 416 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 DUSP28Q4G0W2 176 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 ZNF730Q6ZMV8 503 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 TMEM125Q96AQ2 219 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SLC30A3Q99726 388 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 PDCD10Q9BUL8 212 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 HAPLN2Q9GZV7 340 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 NAA50Q9GZZ1 169 aaKnown RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 TP63Q9H3D4 680 aaPredicted RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SMURF1Q9HCE7 757 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 PHRF1Q9P1Y6 1649 aaKnown RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 CNTN5O94779 1100 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SPATA31D3P0C874 917 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 ZNF24P17028 368 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 OXTRP30559 389 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SH3BP2P78314 561 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 CSTF1Q05048 431 aaKnown RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 CBLBQ13191 982 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SPATA31D4Q6ZUB0 917 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 NUDT18Q6ZVK8 323 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 ITIH5Q86UX2 942 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 TSPYL5Q86VY4 417 aaPredicted RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SLITRK4Q8IW52 837 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 CLEC4AQ9UMR7 237 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 KCTD3Q9Y597 815 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 MANBAO00462 879 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 IFNA16P05015 189 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 RPL10P27635 214 aaKnown RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 XKP51811 444 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 SCARB2Q14108 478 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 KANK2Q63ZY3 851 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 CYP4V2Q6ZWL3 525 aaPredicted RBP15.52■□□□□ 0.08
SLIT3-201ENST00000332966 NDNFQ8TB73 568 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 RACGAP1Q9H0H5 632 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 KCNH6Q9H252 994 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 PDLIM7Q9NR12 457 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 PCDHGB6Q9Y5F9 930 aa15.52■□□□□ 0.08
SLIT3-201ENST00000332966 FAM86C2PA6NEL3 165 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 OR2B3O76000 313 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 ACSL1P33121 698 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 MAPK9P45984 424 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 CDH4P55283 916 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 NAE1Q13564 534 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 C10orf62Q5T681 223 aaPredicted RBP15.52■□□□□ 0.07
SLIT3-201ENST00000332966 GJD3Q8N144 294 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 PCDHGA11Q9Y5H2 935 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 STON1Q9Y6Q2 735 aa15.52■□□□□ 0.07
SLIT3-201ENST00000332966 FAM72CH0Y354 149 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 ACOT8O14734 319 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 MMP3P08254 477 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 RPS3P23396 243 aaKnown RBP eCLIP15.51■□□□□ 0.07
SLIT3-201ENST00000332966 PNLIPRP1P54315 467 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 BEX3Q00994 111 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 PUDPQ08623 228 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 IDNKQ5T6J7 187 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 FAM72AQ5TYM5 149 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 FAM72DQ6L9T8 149 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 AMIGO1Q86WK6 493 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 FAM72BQ86X60 149 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 FAM20CQ8IXL6 584 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 ZNF655Q8N720 491 aaPredicted RBP15.51■□□□□ 0.07
SLIT3-201ENST00000332966 ALPK1Q96QP1 1244 aa15.51■□□□□ 0.07
SLIT3-201ENST00000332966 SLA2Q9H6Q3 261 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms