RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 VLDLRP98155 873 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 TARDBPQ13148 414 aaKnown RBP eCLIP12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.42
CCDC60-201ENST00000327554 XKR4Q5GH76 650 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 ZMAT1Q5H9K5 638 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 RAP1GAP2Q684P5 730 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 NOTUMQ6P988 496 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF551Q7Z340 670 aaPredicted RBP12.46□□□□□ -0.42
CCDC60-201ENST00000327554 GLRX5Q86SX6 157 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 ADAMTSL2Q86TH1 951 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 GPSM1Q86YR5 675 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CACTIN-AS1Q8N1I8 211 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 LSMEM1Q8N8F7 131 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 SNAPC3Q92966 411 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CEP19Q96LK0 163 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 COQ7Q99807 217 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 TTPALQ9BTX7 342 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 BEX2Q9BXY8 128 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 DPY30Q9C005 99 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CLMPQ9H6B4 373 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 QTRT2Q9H974 415 aaKnown RBP12.46□□□□□ -0.42
CCDC60-201ENST00000327554 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CD274Q9NZQ7 290 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CFL2Q9Y281 166 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 SAMHD1Q9Y3Z3 626 aaKnown RBP12.46□□□□□ -0.42
CCDC60-201ENST00000327554 KLK4Q9Y5K2 254 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 A0A0B4J293 547 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 CLCA1A8K7I4 914 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 CPNE3O75131 537 aaKnown RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 GJB3O75712 270 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 CYP7B1O75881 506 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 IL6P05231 212 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF280AP59817 542 aaPredicted RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 EFR3AQ14156 821 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF79Q15937 498 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 C18orf21Q32NC0 220 aaPredicted RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 MARC1Q5VT66 337 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 NKAPQ8N5F7 415 aaKnown RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 ZFAND1Q8TCF1 268 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 PEX13Q92968 403 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 RNF31Q96EP0 1072 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 PPP3R2Q96LZ3 170 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 OR52E6Q96RD3 313 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 SAMD4AQ9UPU9 718 aaKnown RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 B8ZZF3 427 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 E9PAM4 449 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 STSP08842 583 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 PIRTP0C851 137 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 HAPLN1P10915 354 aaPredicted RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 HOXB9P17482 250 aaPredicted RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 HYAL2Q12891 473 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 TP53BP2Q13625 1128 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 LRIF1Q5T3J3 769 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 C19orf48Q6RUI8 117 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 LIX1LQ8IVB5 337 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 LIX1Q8N485 282 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 GLB1L3Q8NCI6 653 aaPredicted RBP12.45□□□□□ -0.42
CCDC60-201ENST00000327554 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 ASB15Q8WXK1 588 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 GABARAPL3Q9BY60 117 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF408Q9H9D4 720 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 SERHLQ9NQF3 203 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 GPR83Q9NYM4 423 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 SPASTQ9UBP0 616 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 KLHL20Q9Y2M5 609 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 SPEF1Q9Y4P9 236 aa12.45□□□□□ -0.42
CCDC60-201ENST00000327554 CCNDBP1O95273 360 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 PTPN6P29350 595 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 CD83Q01151 205 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 GOLGA7Q7Z5G4 137 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 GRAMD2AQ8IUY3 354 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 OR4M1Q8NGD0 313 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 PPP1R13LQ8WUF5 828 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 HMCESQ96FZ2 354 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 SPATA17Q96L03 361 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 COL21A1Q96P44 957 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 VPS35Q96QK1 796 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 C3orf14Q9HBI5 128 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 MIOSQ9NXC5 875 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 A0A1W2PQ09 198 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 A0A1W2PQ72 361 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 WNT9AO14904 365 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 SHOXO15266 292 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 AOC2O75106 756 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
CCDC60-201ENST00000327554 FABP3P05413 133 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 MLLT3P42568 568 aaPredicted RBP12.44□□□□□ -0.42
CCDC60-201ENST00000327554 NUDT6P53370 316 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 ABHD18Q0P651 414 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 FAPQ12884 760 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 SLC14A1Q13336 389 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 GNASQ5JWF2 1037 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 SUSD1Q6UWL2 747 aa12.44□□□□□ -0.42
CCDC60-201ENST00000327554 IDO2Q6ZQW0 420 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms