RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 CNTN6Q9UQ52 1028 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 HYKKA2RU49 373 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 USP12O75317 370 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 MARCKSL1P49006 195 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 MERTKQ12866 999 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 SEZ6Q53EL9 994 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 RAB11FIP2Q7L804 512 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 MOB1BQ7L9L4 216 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 MFSD2AQ8NA29 543 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 IL31RAQ8NI17 732 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 PPTC7Q8NI37 304 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 SGCDQ92629 289 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 ZNF570Q96NI8 536 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 KLHL5Q96PQ7 755 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 AARSD1Q9BTE6 412 aaKnown RBP6.21□□□□□ -1.42
SSH1-202ENST00000326495 UCK2Q9BZX2 261 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 FN3KQ9H479 309 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 PIH1D1Q9NWS0 290 aaKnown RBP6.21□□□□□ -1.42
SSH1-202ENST00000326495 FLRT1Q9NZU1 646 aa6.21□□□□□ -1.42
SSH1-202ENST00000326495 EIF3KQ9UBQ5 218 aaKnown RBP6.21□□□□□ -1.42
SSH1-202ENST00000326495 PCNX2A6NKB5 2137 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ADAMTS3O15072 1205 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ZNF208O43345 1280 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 HSD17B7P56937 341 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CAMK2DQ13557 499 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 FAM171A1Q5VUB5 890 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NPNTQ6UXI9 565 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 LRRC70Q7Z2Q7 622 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ZNF440Q8IYI8 595 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 KLHL36Q8N4N3 616 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CHFRQ96EP1 664 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 S100A16Q96FQ6 103 aaKnown RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 LRIG1Q96JA1 1093 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 TRNT1Q96Q11 434 aaKnown RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 OSBPL7Q9BZF2 842 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CPNE5Q9HCH3 593 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 MRPL17Q9NRX2 175 aaKnown RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 WASF3Q9UPY6 502 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 MEGF11A6BM72 1044 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NPC1O15118 1278 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SLC19A2O60779 497 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 PRAF2O60831 178 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SELENOVP59797 346 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 TLE3Q04726 772 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 IKBKEQ14164 716 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 KCNJ8Q15842 424 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CRTC2Q53ET0 693 aaPredicted RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 FRRS1Q6ZNA5 592 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 PDSS2Q86YH6 399 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 C10orf82Q8WW14 230 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CCM2Q9BSQ5 444 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CADM1Q9BY67 442 aaKnown RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 PNPOQ9NVS9 261 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SLIT2O94813 1529 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 OR2AT4A6NND4 320 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NME6O75414 186 aaPredicted RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 PSMD10O75832 226 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 IFNA10P01566 189 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 IFNA4P05014 189 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 PGDP52209 483 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CRADDP78560 199 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 MRPS5P82675 430 aaKnown RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 DLG2Q15700 870 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 MAPK14Q16539 360 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 IFI44LQ53G44 452 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CYS1Q717R9 158 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 HID1Q8IV36 788 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 METTL21AQ8WXB1 218 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SEC14L1Q92503 715 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 RAD51AP1Q96B01 352 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 GIMAP5Q96F15 307 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 GPER1Q99527 375 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 AGO3Q9H9G7 860 aaKnown RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 KLHL42Q9P2K6 505 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 PXDNQ92626 1479 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NOTOA8MTQ0 251 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ACVR2AP27037 513 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 CCR10P46092 362 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 MPP2Q14168 576 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 AMIGO1Q86WK6 493 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 C16orf58Q96GQ5 468 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 TCF25Q9BQ70 676 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 LPIN3Q9BQK8 851 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NDC1Q9BTX1 674 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ZNF717Q9BY31 904 aaPredicted RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 LIPT1Q9Y234 373 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NPEPPSL1A6NEC2 478 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 VEGFDO43915 354 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 BCAS2O75934 225 aaPredicted RBP6.2□□□□□ -1.42
SSH1-202ENST00000326495 PRH1P02810 166 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SF3B4Q15427 424 aaKnown RBP eCLIP6.2□□□□□ -1.42
SSH1-202ENST00000326495 NKAPLQ5M9Q1 402 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 PDSS1Q5T2R2 415 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ZNF613Q6PF04 617 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 ARL9Q6T311 187 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SLC51BQ86UW2 128 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 GPR156Q8NFN8 814 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 SGK2Q9HBY8 427 aa6.2□□□□□ -1.42
SSH1-202ENST00000326495 NAP1L6A6NFF2 107 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms