RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TP63Q9H3D4 680 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 FAM204AQ9H8W3 233 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MOSPD1Q9UJG1 213 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 FOXD3Q9UJU5 478 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 TBC1D30Q9Y2I9 924 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 GOLGA6L10A6NI86 522 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GRAP2O75791 330 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 KLF7O75840 302 aaPredicted RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 RASSF9O75901 435 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF30P17039 623 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 PHBP35232 272 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GNPDA1P46926 289 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ALDH6A1Q02252 535 aaKnown RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 WASHC5Q12768 1159 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GPS1Q13098 491 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 SWT1Q5T5J6 900 aaKnown RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 DARS2Q6PI48 645 aaKnown RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GSTA5Q7RTV2 222 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GALNT7Q86SF2 657 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 SYTL1Q8IYJ3 562 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 NUP43Q8NFH3 380 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 FAM76AQ8TAV0 307 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 PTERQ96BW5 349 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 OR2M4Q96R27 311 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 CD180Q99467 661 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 CCDC77Q9BR77 488 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GBA3Q9H227 469 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ACSS3Q9H6R3 686 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 DDIT4Q9NX09 232 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 SLC12A6Q9UHW9 1150 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 FBXL4Q9UKA2 621 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 MAGEB16A2A368 324 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 MFSD11O43934 449 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 CDH16O75309 829 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 USP1O94782 785 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 PVRP15151 417 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ERCC2P18074 760 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 CNTFP26441 200 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 TPI1P60174 286 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 SARNPP82979 210 aaKnown RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 NFATC2Q13469 925 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 SNX1Q13596 522 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 CAPRIN1Q14444 709 aaKnown RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 DBN1Q16643 649 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 CDO1Q16878 200 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 KLHL38Q2WGJ6 581 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 RALGPS1Q5JS13 557 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ITPRIPL1Q6GPH6 555 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 LCN10Q6JVE6 187 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF534Q76KX8 674 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ARHGAP12Q8IWW6 846 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 PEX13Q92968 403 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 FAM149B1Q96BN6 582 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 TKTL2Q9H0I9 626 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 TNKS2Q9H2K2 1166 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ARNT2Q9HBZ2 717 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ATP13A1Q9HD20 1204 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 PCMTD2Q9NV79 361 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 OR12D3Q9UGF7 316 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 GPN3Q9UHW5 284 aaPredicted RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 RIMKLBQ9ULI2 386 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 DNAJC16Q9Y2G8 782 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
CSTF3-201ENST00000323959 RRP15Q9Y3B9 282 aaKnown RBP6.38□□□□□ -1.39
CSTF3-201ENST00000323959 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 GOLGA6CA6NDK9 693 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 CLCA1A8K7I4 914 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SYT5O00445 386 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 PRPF4O43172 522 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 CLDN11O75508 207 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF821O75541 412 aaPredicted RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 LRIG2O94898 1065 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 CEACAM5P06731 702 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 GOLGA6DP0CG33 693 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 EPXP11678 715 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 FOLR1P15328 257 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 CES1P23141 567 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 RBL1P28749 1068 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 PTH2RP49190 550 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SERPINH1P50454 418 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 PITX1P78337 314 aaPredicted RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SLC29A2Q14542 456 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 RFTN1Q14699 578 aaPredicted RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 PARP15Q460N3 678 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ANKRD20A2Q5SQ80 823 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ANKRD20A1Q5TYW2 823 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ANKRD20A3Q5VUR7 823 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 RETSATQ6NUM9 610 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SCYL2Q6P3W7 929 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ADGRD1Q6QNK2 874 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 RGS9BPQ6ZS82 235 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 FAM131BQ86XD5 332 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SIAH3Q8IW03 269 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 CHERPQ8IWX8 916 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 PDIK1LQ8N165 341 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 D2HGDHQ8N465 521 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SMPDL3BQ92485 455 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ISL2Q96A47 359 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ZBED6CLQ96FA7 236 aaPredicted RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 FCRL5Q96RD9 977 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms