RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SVOPQ8N4V2 548 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 ZNF548Q8NEK5 533 aaPredicted RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 OR2T29Q8NH02 315 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 OR5AK3PQ8NH89 298 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 ARRDC2Q8TBH0 407 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 ASB2Q96Q27 587 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 TMEM121BQ9BXQ6 578 aaPredicted RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 ASB8Q9H765 288 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 UCKL1Q9NWZ5 548 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SIRT5Q9NXA8 310 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 THUMPD1Q9NXG2 353 aaKnown RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 THSD7BQ9C0I4 1608 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 HHLA1C9JL84 531 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 E2F3O00716 465 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 DNAJB2P25686 324 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 RRM2P31350 389 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 CTSKP43235 329 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 ATP4BP51164 291 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 POM121L1PQ3SYA9 428 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SPDYE7PQ495Y7 208 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 USP39Q53GS9 565 aaKnown RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SMUG1Q53HV7 270 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 LRRC66Q68CR7 880 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 GLCCI1Q86VQ1 547 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 GHDCQ8N2G8 530 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 STK40Q8N2I9 435 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SETD9Q8NE22 299 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 PYURFQ96I23 114 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 HSH2DQ96JZ2 352 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 TSGA13Q96PP4 275 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 LINC00597Q9H2U6 94 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 RMND5AQ9H871 391 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SDK1Q7Z5N4 2213 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 LCHNA4D1U4 455 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 PDHXO00330 501 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 LRRTM2O43300 516 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SOX3P41225 446 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 TAF12Q16514 161 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 PTCHD3Q3KNS1 767 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 CCDC58Q4VC31 144 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 FAAH2Q6GMR7 532 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 MSANTD2Q6P1R3 559 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 ALKAL1Q6UXT8 129 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 BHLHA9Q7RTU4 235 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 DYNC2LI1Q8TCX1 351 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 OMA1Q96E52 524 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 CCM2Q9BSQ5 444 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 EMILIN2Q9BXX0 1053 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 YTHDF1Q9BYJ9 559 aaKnown RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SLIRPQ9GZT3 109 aaKnown RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 TMEFF2Q9UIK5 374 aaPredicted RBP13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SBF1O95248 1867 aa13.83□□□□□ -0.19
PABPC1-201ENST00000318607 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RGS14O43566 566 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 MGEA5O60502 916 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 VPS4BO75351 444 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ENGP17813 658 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 EIF2DP41214 584 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 PPP3CCP48454 512 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ST3GAL4Q11206 333 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RNASE12Q5GAN4 147 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 OTOP2Q7RTS6 562 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 MMAAQ8IVH4 418 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 WDR36Q8NI36 951 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 COPS8Q99627 209 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RANGRFQ9HD47 186 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RLIMQ9NVW2 624 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 CLCA3PQ9Y6N3 262 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 EIF3FO00303 357 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 IFRD1O00458 451 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 DYRK3O43781 588 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 NUAK1O60285 661 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 GABARAPO95166 117 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 BCKDHAP12694 445 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ITIH1P19827 911 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 PCMT1P22061 227 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 CD6P30203 668 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 SLC26A3P40879 764 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ZFP36L2P47974 494 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 CAV3P56539 151 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RFX4Q33E94 735 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ERAP2Q6P179 960 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ZNF605Q86T29 641 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 PTRH1Q86Y79 214 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 OR5M11Q96RB7 305 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 FEVQ99581 238 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 CTRCQ99895 268 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ADAM2Q99965 735 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 DERAQ9Y315 318 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RAI2Q9Y5P3 530 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RRN3P2A6NIE6 340 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 KIAA0513O60268 411 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 PTHP01270 115 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 COX7A2P14406 83 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms