RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RNF219Q5W0B1 726 aaPredicted RBP18.6■□□□□ 0.57
RTN4-201ENST00000317610 CXorf57Q6NSI4 855 aaKnown RBP18.6■□□□□ 0.57
RTN4-201ENST00000317610 FAM151BQ6UXP7 276 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 RNF19BQ6ZMZ0 732 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 PAGE2Q7Z2X7 111 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 ANKRD46Q86W74 232 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 CCDC71Q8IV32 467 aaPredicted RBP18.6■□□□□ 0.57
RTN4-201ENST00000317610 DENND1CQ8IV53 801 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 RPL3LQ92901 407 aaKnown RBP18.6■□□□□ 0.57
RTN4-201ENST00000317610 DACH2Q96NX9 599 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 PCDHB9Q9Y5E1 797 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 TRBV5-4A0A0C4DH59 114 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 SLC38A8A6NNN8 435 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 WBP4O75554 376 aaKnown RBP18.59■□□□□ 0.57
RTN4-201ENST00000317610 STK16O75716 305 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 PDYNP01213 254 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 CD36P16671 472 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 EPORP19235 508 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 TWF1Q12792 350 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 CCDC92Q53HC0 331 aaPredicted RBP18.59■□□□□ 0.57
RTN4-201ENST00000317610 DOK6Q6PKX4 331 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 MACC1Q6ZN28 852 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 ARMC8Q8IUR7 673 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 C19orf43Q9BQ61 176 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 AASDHPPTQ9NRN7 309 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 GPRC5BQ9NZH0 403 aa18.59■□□□□ 0.57
RTN4-201ENST00000317610 PDP1Q9P0J1 537 aaPredicted RBP18.59■□□□□ 0.57
RTN4-201ENST00000317610 NPIPB8E9PQR5 432 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 H0Y626 953 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 UPK1BO75841 260 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 TRIM16O95361 564 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 B3GALT4O96024 378 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 KLKB1P03952 638 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 FABP3P05413 133 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 PABPC1P11940 636 aaKnown RBP18.58■□□□□ 0.57
RTN4-201ENST00000317610 ALDH7A1P49419 539 aaKnown RBP18.58■□□□□ 0.57
RTN4-201ENST00000317610 IL1RL1Q01638 556 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 FAHD1Q6P587 224 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 TUBA3EQ6PEY2 450 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 TTC23LQ6PF05 361 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 LINGO4Q6UY18 593 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 PLD3Q8IV08 490 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 SLC38A4Q969I6 547 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 CORO1BQ9BR76 489 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 KLHL25Q9H0H3 589 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 RPS6KA6Q9UK32 745 aa18.58■□□□□ 0.57
RTN4-201ENST00000317610 EFCAB9A8MZ26 197 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 MYO1GB0I1T2 1018 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 RFXANKO14593 260 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 GSTT2P0CG29 244 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 GSTT2BP0CG30 244 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 CYBAP13498 195 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 SDC1P18827 310 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 EPHA2P29317 976 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 PPP3CCP48454 512 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 CSNK2BP67870 215 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 TUBA1BP68363 451 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 VLDLRP98155 873 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 SELENBP1Q13228 472 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 NFATC2Q13469 925 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 GGTA1PQ4G0N0 100 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 RSPO2Q6UXX9 243 aaPredicted RBP18.58■□□□□ 0.56
RTN4-201ENST00000317610 SLC24A5Q71RS6 500 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 TUBA1AQ71U36 451 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 ZZZ3Q8IYH5 903 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 CLDN19Q8N6F1 224 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 MCFD2Q8NI22 146 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 FCGR1BQ92637 280 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 PYCR2Q96C36 320 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 ZHX1-C8orf76Q96EF9 292 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 UGT2A1Q9Y4X1 527 aa18.58■□□□□ 0.56
RTN4-201ENST00000317610 KCNE1BA0A087WTH5 132 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 DPM1O60762 260 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 MYO1DO94832 1006 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 GJB5O95377 273 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 EIF2S1P05198 315 aaKnown RBP18.57■□□□□ 0.56
RTN4-201ENST00000317610 LCKP06239 509 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ALPIP09923 528 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ACPPP15309 386 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 CTPS1P17812 591 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 TACR1P25103 407 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ACRV1P26436 265 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 SMARCB1Q12824 385 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 MTAPQ13126 283 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 KCNJ8Q15842 424 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 VMACQ2NL98 169 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 CDKL4Q5MAI5 379 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 CPA6Q8N4T0 437 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 APH1BQ8WW43 257 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 PIH1D2Q8WWB5 315 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 LINC01599Q8WXQ3 324 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 STARD8Q92502 1023 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 PLD4Q96BZ4 506 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 MTFMTQ96DP5 389 aaKnown RBP18.57■□□□□ 0.56
RTN4-201ENST00000317610 CMTM7Q96FZ5 175 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 TSSK3Q96PN8 268 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ITPAQ9BY32 194 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 GPR62Q9BZJ7 368 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 MMP27Q9H306 513 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ASB8Q9H765 288 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms