RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PHF2O75151 1096 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 USP1O94782 785 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 ONECUT2O95948 504 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 CD97P48960 835 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 SLC9A5Q14940 896 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 LONRF1Q17RB8 773 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 CCSMST1Q4G0I0 132 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 ACSBG2Q5FVE4 666 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 NEK10Q6ZWH5 1172 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 PPIL6Q8IXY8 311 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 OR2A1Q8NGT9 310 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
TPM1-203ENST00000317516 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 ZNF285Q96NJ3 590 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 OSBPL9Q96SU4 736 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 C20orf96Q9NUD7 363 aaPredicted RBP17.02■□□□□ 0.32
TPM1-203ENST00000317516 C5AR2Q9P296 337 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 TSR3Q9UJK0 312 aaKnown RBP17.02■□□□□ 0.32
TPM1-203ENST00000317516 NEU2Q9Y3R4 380 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.32
TPM1-203ENST00000317516 ZCWPW2A0A1B0GU75 182 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 CES2O00748 559 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 VPS4BO75351 444 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 PSIP1O75475 530 aaKnown RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 ALPPP05187 535 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 VARSP26640 1264 aaKnown RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 RPA3P35244 121 aaPredicted RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 GCGRP47871 477 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 VSX2P58304 361 aaPredicted RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 CTBP1Q13363 440 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 UBAP2LQ14157 1087 aaKnown RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 PPP1R7Q15435 360 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 WASHC2DQ5SRD0 308 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 VWA5B1Q5TIE3 1220 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 REXO1L1PQ8IX06 675 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 SLC35F6Q8N357 371 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 NAT8LQ8N9F0 302 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 COG1Q8WTW3 980 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 KCNJ9Q92806 393 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 VPS50Q96JG6 964 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 SMAD5Q99717 465 aaKnown RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 NUDT9Q9BW91 350 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 WDR54Q9H977 334 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 ATP13A2Q9NQ11 1180 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 SLAMF7Q9NQ25 335 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 P4HTMQ9NXG6 502 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 NXT1Q9UKK6 140 aaKnown RBP17.01■□□□□ 0.31
TPM1-203ENST00000317516 VPS4AQ9UN37 437 aa17.01■□□□□ 0.31
TPM1-203ENST00000317516 NBASA2RRP1 2371 aa17■□□□□ 0.31
TPM1-203ENST00000317516 A0A0J9YVX5 310 aa17■□□□□ 0.31
TPM1-203ENST00000317516 HYKKA2RU49 373 aa17■□□□□ 0.31
TPM1-203ENST00000317516 ARHGEF33A8MVX0 844 aa17■□□□□ 0.31
TPM1-203ENST00000317516 MYO1CO00159 1063 aa17■□□□□ 0.31
TPM1-203ENST00000317516 CTSVO60911 334 aa17■□□□□ 0.31
TPM1-203ENST00000317516 IPO13O94829 963 aaKnown RBP17■□□□□ 0.31
TPM1-203ENST00000317516 ERVK-10P10266 1014 aa17■□□□□ 0.31
TPM1-203ENST00000317516 ENO3P13929 434 aaPredicted RBP17■□□□□ 0.31
TPM1-203ENST00000317516 ITGAXP20702 1163 aa17■□□□□ 0.31
TPM1-203ENST00000317516 PSMB5P28074 263 aa17■□□□□ 0.31
TPM1-203ENST00000317516 CLCN7P51798 805 aa17■□□□□ 0.31
TPM1-203ENST00000317516 NADK2Q4G0N4 442 aa17■□□□□ 0.31
TPM1-203ENST00000317516 PCGF5Q86SE9 256 aa17■□□□□ 0.31
TPM1-203ENST00000317516 DENND6AQ8IWF6 608 aa17■□□□□ 0.31
TPM1-203ENST00000317516 GALNT16Q8N428 558 aa17■□□□□ 0.31
TPM1-203ENST00000317516 CPT1CQ8TCG5 803 aa17■□□□□ 0.31
TPM1-203ENST00000317516 INPP5DQ92835 1189 aa17■□□□□ 0.31
TPM1-203ENST00000317516 ZFYVE21Q9BQ24 234 aa17■□□□□ 0.31
TPM1-203ENST00000317516 TRIM56Q9BRZ2 755 aaKnown RBP17■□□□□ 0.31
TPM1-203ENST00000317516 FAM167BQ9BTA0 163 aa17■□□□□ 0.31
TPM1-203ENST00000317516 DPH7Q9BTV6 452 aa17■□□□□ 0.31
TPM1-203ENST00000317516 ACAT2Q9BWD1 397 aa17■□□□□ 0.31
TPM1-203ENST00000317516 SLC26A1Q9H2B4 701 aa17■□□□□ 0.31
TPM1-203ENST00000317516 MRPS30Q9NP92 439 aaKnown RBP17■□□□□ 0.31
TPM1-203ENST00000317516 FBXO6Q9NRD1 293 aaPredicted RBP17■□□□□ 0.31
TPM1-203ENST00000317516 SLC22A11Q9NSA0 550 aa17■□□□□ 0.31
TPM1-203ENST00000317516 ANKMY1Q9P2S6 941 aa17■□□□□ 0.31
TPM1-203ENST00000317516 GALPQ9UBC7 116 aa17■□□□□ 0.31
TPM1-203ENST00000317516 ZC3H7BQ9UGR2 993 aaKnown RBP17■□□□□ 0.31
TPM1-203ENST00000317516 SNX12Q9UMY4 172 aa17■□□□□ 0.31
TPM1-203ENST00000317516 UBR5O95071 2799 aaPredicted RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 A0A1W2PPV9 198 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 AGPSO00116 658 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 ZBTB14O43829 449 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 CNOT3O75175 753 aaKnown RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 VPS26AO75436 327 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 CCNDBP1O95273 360 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 EIF2S1P05198 315 aaKnown RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 UMODP07911 640 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 MPC1LP0DKB6 136 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 ERGP11308 486 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 MMP11P24347 488 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 MCM3P25205 808 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 MAGEA3P43357 314 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 PNLIPRP1P54315 467 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 PTK6Q13882 451 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 FASTKQ14296 549 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms