RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 CLDN7O95471 211 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 DBIP07108 87 aaKnown RBP13.98□□□□□ -0.17
TRIM25-201ENST00000316881 FOXN2P32314 431 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 DMPKQ09013 629 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 PAQR3Q6TCH7 311 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 LPGAT1Q92604 370 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 GRID2O43424 1007 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 METTL18O95568 372 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 RHOP08100 348 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 PER3P56645 1201 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 GFOD2Q3B7J2 385 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 UBAP2Q5T6F2 1119 aaKnown RBP13.98□□□□□ -0.17
TRIM25-201ENST00000316881 FAM110BQ8TC76 370 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 PXYLP1Q8TE99 480 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 ZNF516Q92618 1163 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 BADQ92934 168 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 BHLHE41Q9C0J9 482 aaPredicted RBP13.98□□□□□ -0.17
TRIM25-201ENST00000316881 FARSBQ9NSD9 589 aaKnown RBP13.98□□□□□ -0.17
TRIM25-201ENST00000316881 TRAPPC6AO75865 159 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 FADS2O95864 444 aaKnown RBP13.98□□□□□ -0.17
TRIM25-201ENST00000316881 DECR1Q16698 335 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 LRRC66Q68CR7 880 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 DNM1P34Q6PK57 102 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 SMARCD3Q6STE5 483 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 TUBGCP5Q96RT8 1024 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 CYP2S1Q96SQ9 504 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 CADM1Q9BY67 442 aaKnown RBP13.98□□□□□ -0.17
TRIM25-201ENST00000316881 ZNF222Q9UK12 451 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 TESMINQ9Y4I5 508 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 SNED1Q8TER0 1413 aa13.98□□□□□ -0.17
TRIM25-201ENST00000316881 CXCR6O00574 342 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 NELFEP18615 380 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 EIF2B2P49770 351 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 GMFBP60983 142 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 SLC5A9Q2M3M2 681 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 SVOPLQ8N434 492 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 RAB7BQ96AH8 199 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PYCR2Q96C36 320 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 METTL7AQ9H8H3 244 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 RSL24D1Q9UHA3 163 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PPEF2O14830 753 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 SEPHS1P49903 392 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 SERINC3Q13530 473 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 KHDC1Q4VXA5 237 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 AMIGO1Q86WK6 493 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PSMA8Q8TAA3 256 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ZDHHC12Q96GR4 267 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ZSWIM3Q96MP5 696 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 OR51V1Q9H2C8 321 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ELAC1Q9H777 363 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 GPN1Q9HCN4 374 aaPredicted RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ETAA1Q9NY74 926 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 P2RX2Q9UBL9 471 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ING4Q9UNL4 249 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 TCRBV21S2A2A0A5A6 115 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 CAPN8A6NHC0 703 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 J3KR12 359 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 THRBP10828 461 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 HLA-EP13747 358 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 EFNA1P20827 205 aaPredicted RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 RPL10P27635 214 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 SDC2P34741 201 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 YAP1P46937 504 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 VBP1P61758 197 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 HERVK_113P63132 956 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 VLDLRP98155 873 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 RPL6Q02878 288 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 RGS21Q2M5E4 152 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PAOXQ6QHF9 649 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 DCUN1D3Q8IWE4 304 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ERVK-6Q9BXR3 956 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 NKIRAS2Q9NYR9 191 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 CYP8B1Q9UNU6 501 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 CFAP20Q9Y6A4 193 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ACVR2AP27037 513 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 CBFBQ13951 182 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.179e-7■□□□□ 10.6
TRIM25-201ENST00000316881 FAM214AQ32MH5 1076 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 BICRALQ6AI39 1079 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 MEIOBQ8N635 442 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 CAPSLQ8WWF8 208 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 FAM53CQ9NYF3 392 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PLOD3O60568 738 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 ERVK-8P63133 956 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 GPR107Q5VW38 600 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 FAM47BQ8NA70 645 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 COQ8BQ96D53 544 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PLEKHG4BQ96PX9 1271 aa13.97□□□□□ -0.17
TRIM25-201ENST00000316881 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
TRIM25-201ENST00000316881 NALCNQ8IZF0 1738 aa13.96□□□□□ -0.17
TRIM25-201ENST00000316881 OR51F1A6NGY5 319 aa13.96□□□□□ -0.17
TRIM25-201ENST00000316881 GNB5O14775 395 aa13.96□□□□□ -0.17
TRIM25-201ENST00000316881 RPS21P63220 83 aaKnown RBP13.96□□□□□ -0.17
TRIM25-201ENST00000316881 FRG2Q64ET8 278 aa13.96□□□□□ -0.17
TRIM25-201ENST00000316881 FAM131AQ6UXB0 335 aa13.96□□□□□ -0.17
TRIM25-201ENST00000316881 OSTM1Q86WC4 334 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms