RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ZUFSPQ96AP4 578 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 TREX1Q9NSU2 369 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 INTS7Q9NVH2 962 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 TTC7AQ9ULT0 858 aaPredicted RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 RUVBL2Q9Y230 463 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 SLC5A6Q9Y289 635 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 MAU2Q9Y6X3 613 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 VSTM2BA6NLU5 285 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 C1orf105O95561 183 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 NMBRP28336 390 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 BDKRB1P46663 353 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 TTPAP49638 278 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 SESN2P58004 480 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 VSX2P58304 361 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 YBX1P67809 324 aaKnown RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 Q0VFX4 171 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 TCTE1Q5JU00 501 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 PCID2Q5JVF3 399 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 WASHC2DQ5SRD0 308 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 SEL1L2Q5TEA6 688 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 YOD1Q5VVQ6 348 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 FRMPD2BQ6IN97 320 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 IGFL2Q6UWQ7 119 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 UBE2Q2Q8WVN8 375 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 MIPEPQ99797 713 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 WDR77Q9BQA1 342 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 PAK5Q9P286 719 aa16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 STOX2Q9P2F5 926 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 NOVA2Q9UNW9 492 aaKnown RBP16.7■□□□□ 0.26
EXOSC4-201ENST00000316052 LOC105369274A0A096LPK9 316 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 LOC102723532A0A0G2JNH3 316 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 A0A1W2PPV9 198 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 TMED2Q15363 201 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 SIX1Q15475 284 aaPredicted RBP16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 AGAP7PQ5VUJ5 663 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 OR4N4Q8N0Y3 316 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 TXLNBQ8N3L3 684 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 OR11G2Q8NGC1 345 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 OR2A1Q8NGT9 310 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 RAD51AP1Q96B01 352 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 AGAP4Q96P64 663 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 GNPTGQ9UJJ9 305 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 KLK4Q9Y5K2 254 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 ABCA12Q86UK0 2595 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 MYO7BQ6PIF6 2116 aa16.69■□□□□ 0.26
EXOSC4-201ENST00000316052 A0A0J9YVX5 310 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 HYKKA2RU49 373 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 SRPX2O60687 465 aaPredicted RBP16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 FKBP9O95302 570 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 RPS3P23396 243 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■■■■□ 21.2
EXOSC4-201ENST00000316052 ARNTP27540 789 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 DCTP40126 519 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 FASTKQ14296 549 aaKnown RBP16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 FAM214AQ32MH5 1076 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 CTSL3PQ5NE16 218 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 FBXO42Q6P3S6 717 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 TTC23LQ6PF05 361 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 CES3Q6UWW8 571 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 OTOAQ7RTW8 1153 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 KCNMB4Q86W47 210 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 GAS2L3Q86XJ1 694 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 TTC29Q8NA56 475 aaPredicted RBP16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 OR2L3Q8NG85 312 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 HMGCLL1Q8TB92 370 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 DNAJB14Q8TBM8 379 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 PPP4R1Q8TF05 950 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 SKA2Q8WVK7 121 aaPredicted RBP16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 BIRC8Q96P09 236 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 RAB11FIP5Q9BXF6 653 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 MRM3Q9HC36 420 aaKnown RBP16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 SEMA3GQ9NS98 782 aa16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 ZC3H7BQ9UGR2 993 aaKnown RBP16.68■□□□□ 0.26
EXOSC4-201ENST00000316052 NDUFS3O75489 264 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 ELOAQ14241 798 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 RBBP7Q16576 425 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 CCNG2Q16589 344 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 TUBB8Q3ZCM7 444 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 CNSTQ6PJW8 725 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 LRRC6Q86X45 466 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 PRSS58Q8IYP2 241 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 ST6GALNAC3Q8NDV1 305 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 GSDMBQ8TAX9 411 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 STT3BQ8TCJ2 826 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 GRHL3Q8TE85 626 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 THOC3Q96J01 351 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 LHPPQ9H008 270 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 ZNF304Q9HCX3 659 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 EIF2B3Q9NR50 452 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 IL1RAPL1Q9NZN1 696 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 GALPQ9UBC7 116 aa16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 TSR3Q9UJK0 312 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-201ENST00000316052 NXT1Q9UKK6 140 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms