RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ARSIQ5FYB1 569 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 BRAT1Q6PJG6 821 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 SMG8Q8ND04 991 aaKnown RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 TSPEARQ8WU66 669 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 PIK3R3Q92569 461 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 ZSCAN5AQ9BUG6 496 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 MIR1-1HGQ9H1L0 117 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 ZCCHC3Q9NUD5 404 aaKnown RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 DNAAF2Q9NVR5 837 aaKnown RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 RNF11Q9Y3C5 154 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 ARVCFO00192 962 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 AREL1O15033 823 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 CHRM5P08912 532 aaPredicted RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 TIE1P35590 1138 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 GMPRP36959 345 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 KHKP50053 298 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 PGGT1BP53609 377 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 CRISP3P54108 245 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 STXBP1P61764 594 aaKnown RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 C6orf136Q5SQH8 315 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 DCAF4L2Q8NA75 395 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 POLR2J2Q9GZM3 115 aaKnown RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 IL1RAPQ9NPH3 570 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 NKIRAS2Q9NYR9 191 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 COMMD9Q9P000 198 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 BTN3A3O00478 584 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 C1QTNF8P60827 252 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 MBOAT1Q6ZNC8 495 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 Q6ZVU0 165 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 KRT77Q7Z794 578 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 FAM129CQ86XR2 697 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 CLIP4Q8N3C7 705 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 CADM2Q8N3J6 435 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 PYURFQ96I23 114 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 LRCH3Q96II8 777 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 C12orf66Q96MD2 445 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 CTPS2Q9NRF8 586 aa13.45□□□□□ -0.26
SPAST-201ENST00000315285 RPL36Q9Y3U8 105 aaKnown RBP13.45□□□□□ -0.26
SPAST-201ENST00000315285 FAM92AA1XBS5 289 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 CD1DP15813 335 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 CEACAM7Q14002 265 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZNF563Q8TA94 476 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZNF778Q96MU6 729 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 RPF2Q9H7B2 306 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 AKAP7Q9P0M2 348 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 SPATA7Q9P0W8 599 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 FBXL21Q9UKT6 434 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 RBMX2Q9Y388 322 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 OAS1P00973 400 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 FPR1P21462 350 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 MVKQ03426 396 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 SEMA3AQ14563 771 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 MYLK3Q32MK0 819 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 CRTC2Q53ET0 693 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 LRRC66Q68CR7 880 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 RANBP3LQ86VV4 465 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 FAM110BQ8TC76 370 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 PEX13Q92968 403 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 C12orf43Q96C57 262 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 NUS1Q96E22 293 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 CAPNS2Q96L46 248 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 KLHL31Q9H511 634 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 LIN28AQ9H9Z2 209 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 SNTG1Q9NSN8 517 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 MTRRQ9UBK8 725 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 MYH1P12882 1939 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 MAFKO60675 156 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 KLHL18O94889 574 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 CLIC3O95833 236 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 SRPRAP08240 638 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 DSTNP60981 165 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 RNASE12Q5GAN4 147 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZNF311Q5JNZ3 666 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 NANOGP8Q6NSW7 305 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 THOC6Q86W42 341 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 NUDT13Q86X67 352 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 OR10Q1Q8NGQ4 319 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 OR5AK3PQ8NH89 298 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZCCHC10Q8TBK6 192 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 LMLNQ96KR4 655 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ZNF641Q96N77 438 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 NSUN5Q96P11 429 aaKnown RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 NANOGQ9H9S0 305 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 IKZF2Q9UKS7 526 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 NUP98P52948 1817 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 MCIDASD6RGH6 385 aa13.44□□□□□ -0.26
SPAST-201ENST00000315285 ECDO95905 644 aaPredicted RBP13.44□□□□□ -0.26
SPAST-201ENST00000315285 IL7RP16871 459 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms