RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 KCNC4Q03721 635 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 ABHD18Q0P651 414 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 INAQ16352 499 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 GPR162Q16538 588 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 INO80DQ53TQ3 878 aaPredicted RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 LRIF1Q5T3J3 769 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 PLPP6Q8IY26 295 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 ATG16L2Q8NAA4 619 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SETD9Q8NE22 299 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 DBF4BQ8NFT6 615 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 CASD1Q96PB1 797 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 RRAGCQ9HB90 399 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 AKIP1Q9NQ31 210 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 POLE4Q9NR33 117 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SCN3BQ9NY72 215 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 KIF17Q9P2E2 1029 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 TPRKBQ9Y3C4 175 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 PIKFYVEQ9Y2I7 2098 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 H7C4K7 107 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 TRBC1P01850 177 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SLC35A2P78381 396 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 VLDLRP98155 873 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 GBX1Q14549 363 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 CLCA4Q14CN2 919 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 ZXDCQ2QGD7 858 aaPredicted RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 ZNF621Q6ZSS3 439 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 HORMAD1Q86X24 394 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 APCDD1Q8J025 514 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 ZNF641Q96N77 438 aaPredicted RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 PANX1Q96RD7 426 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SLC32A1Q9H598 525 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 ATP13A3Q9H7F0 1226 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 PRDM8Q9NQV8 689 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SAMD4AQ9UPU9 718 aaKnown RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 SAMHD1Q9Y3Z3 626 aaKnown RBP12.34□□□□□ -0.43
TNIP1-201ENST00000315050 TRIM17Q9Y577 477 aa12.34□□□□□ -0.43
TNIP1-201ENST00000315050 EVPLLA8MZ36 301 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SLC22A1O15245 554 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 FAM20BO75063 409 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 CCNDBP1O95273 360 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SEC24AO95486 1093 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 UGT2B4P06133 528 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 GALTP07902 379 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 ITGAMP11215 1152 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 HMGA1P17096 107 aaKnown RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 ITPKAP23677 461 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 HALP42357 657 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 MAGEA8P43361 318 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 IL18R1Q13478 541 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SMU1Q2TAY7 513 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 TTLL9Q3SXZ7 439 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 CHCHD4Q8N4Q1 142 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 BEND7Q8N7W2 519 aaPredicted RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 MROQ9BYG7 248 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 IL1RAPQ9NPH3 570 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 THG1LQ9NWX6 298 aaKnown RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 FAM8A1Q9UBU6 413 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 LRFN2Q9ULH4 789 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 WNT9AO14904 365 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SH3BGRLO75368 114 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 BMP4P12644 408 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 MAGEA2P43356 314 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 KIR3DL1P43629 444 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 ST13P50502 369 aaKnown RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 FCGRTP55899 365 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SMARCB1Q12824 385 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 SF1Q15637 639 aaKnown RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 DGUOKQ16854 277 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 ZC3H12BQ5HYM0 836 aaKnown RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 UBE2R2Q712K3 238 aaPredicted RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 AHSA2Q719I0 299 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 NXPE1Q8N323 547 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 GPR26Q8NDV2 337 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.441e-11■■■■□ 21.4
TNIP1-201ENST00000315050 TPD52L3Q96J77 140 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 CEP295NLQ96MC4 621 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 REXO4Q9GZR2 422 aaKnown RBP12.33□□□□□ -0.44
TNIP1-201ENST00000315050 RETREG1Q9H6L5 497 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 MAN2B2Q9Y2E5 1009 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 AP3M1Q9Y2T2 418 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 PMF1-BGLAPU3KQ54 211 aa12.33□□□□□ -0.44
TNIP1-201ENST00000315050 TBKBP1A7MCY6 615 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 M0QX08 132 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 CLIC1O00299 241 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 JRKO75564 520 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 DNAJB5O75953 348 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 CPSF4O95639 269 aaKnown RBP12.32□□□□□ -0.44
TNIP1-201ENST00000315050 FABP3P05413 133 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 LCKP06239 509 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 ENGP17813 658 aa12.32□□□□□ -0.44
TNIP1-201ENST00000315050 CCR7P32248 378 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms