RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CPSF4O95639 269 aaKnown RBP24.64■■□□□ 1.54
HOXB3-201ENST00000311626 RETP07949 1114 aa24.64■■□□□ 1.54
HOXB3-201ENST00000311626 EPHA2P29317 976 aa24.64■■□□□ 1.54
HOXB3-201ENST00000311626 SERPINA4P29622 427 aa24.64■■□□□ 1.54
HOXB3-201ENST00000311626 GP2P55259 537 aaKnown RBP24.64■■□□□ 1.54
HOXB3-201ENST00000311626 ZNF691Q5VV52 312 aa24.64■■□□□ 1.54
HOXB3-201ENST00000311626 FKBP10Q96AY3 582 aa24.64■■□□□ 1.54
HOXB3-201ENST00000311626 TSEN34Q9BSV6 310 aaKnown RBP24.64■■□□□ 1.54
HOXB3-201ENST00000311626 UGT2B4P06133 528 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 GABRR2P28476 465 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 CDK5R2Q13319 367 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 MOGQ16653 247 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 PLEKHG6Q3KR16 790 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 GPR33Q49SQ1 333 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 SLC16A12Q6ZSM3 486 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 ZNF554Q86TJ5 538 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 OR2AP1Q8NGE2 309 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 UBE2FQ969M7 185 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 TRMT2BQ96GJ1 504 aaKnown RBP24.64■■□□□ 1.53
HOXB3-201ENST00000311626 NODALQ96S42 347 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 IL21Q9HBE4 155 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 ABCB8Q9NUT2 735 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 C3orf18Q9UK00 162 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 SNX5Q9Y5X3 404 aa24.64■■□□□ 1.53
HOXB3-201ENST00000311626 SCN8AQ9UQD0 1980 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 KCNE1BA0A087WTH5 132 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 NR1D2Q14995 579 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 SMN1Q16637 294 aaKnown RBP24.63■■□□□ 1.53
HOXB3-201ENST00000311626 LRIF1Q5T3J3 769 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 ZNF621Q6ZSS3 439 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 CLECL1Q8IZS7 167 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 RAB2BQ8WUD1 216 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 MTERF1Q99551 399 aaKnown RBP24.63■■□□□ 1.53
HOXB3-201ENST00000311626 SLC29A3Q9BZD2 475 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 THG1LQ9NWX6 298 aaKnown RBP24.63■■□□□ 1.53
HOXB3-201ENST00000311626 SRCP12931 536 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 IGFBP5P24593 272 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 AOAHP28039 575 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 ITGADQ13349 1161 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 ADNP2Q6IQ32 1131 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 DDHD1Q8NEL9 900 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 REXO4Q9GZR2 422 aaKnown RBP24.63■■□□□ 1.53
HOXB3-201ENST00000311626 ARMC7Q9H6L4 198 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 INSL5Q9Y5Q6 135 aa24.63■■□□□ 1.53
HOXB3-201ENST00000311626 DAPP51397 102 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 EPHB3P54753 998 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 LYPLAL1Q5VWZ2 237 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 CPZQ66K79 652 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 CCDC81Q6ZN84 652 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 CYP2U1Q7Z449 544 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 SNX29P2Q8IUI4 249 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 RNF168Q8IYW5 571 aaPredicted RBP24.62■■□□□ 1.53
HOXB3-201ENST00000311626 LZICQ8WZA0 190 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 SCAMP4Q969E2 229 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 RAD21L1Q9H4I0 556 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 HMX1Q9NP08 348 aaPredicted RBP24.62■■□□□ 1.53
HOXB3-201ENST00000311626 ASIC5Q9NY37 505 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 SLCO3A1Q9UIG8 710 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 YY2O15391 372 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 ENGP17813 658 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 CASP9P55211 416 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 GAREM2Q75VX8 874 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 CHST14Q8NCH0 376 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 RDH12Q96NR8 316 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 RMND5AQ9H871 391 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 SNX6Q9UNH7 406 aa24.62■■□□□ 1.53
HOXB3-201ENST00000311626 HOXB9P17482 250 aaPredicted RBP24.61■■□□□ 1.53
HOXB3-201ENST00000311626 EMX1Q04741 257 aaPredicted RBP24.61■■□□□ 1.53
HOXB3-201ENST00000311626 CHIT1Q13231 466 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 NOXRED1Q6NXP6 359 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 TPRG1Q6ZUI0 275 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 MCOLN3Q8TDD5 553 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 MUL1Q969V5 352 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 PANX1Q96RD7 426 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 PCDH12Q9NPG4 1184 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 AASDHPPTQ9NRN7 309 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 ORC6Q9Y5N6 252 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 DOCK6Q96HP0 2047 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 CLPXO76031 633 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 SOD2P04179 222 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 C1SP09871 688 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 HIST1H2AGP0C0S8 130 aaPredicted RBP24.61■■□□□ 1.53
HOXB3-201ENST00000311626 HIST1H2ADP20671 130 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 PCMT1P22061 227 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 OPRL1P41146 370 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 SMU1Q2TAY7 513 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 CENPSQ8N2Z9 138 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 HIST1H2AHQ96KK5 128 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 CNDP2Q96KP4 475 aaKnown RBP24.61■■□□□ 1.53
HOXB3-201ENST00000311626 HIST1H2AJQ99878 128 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 H2AFJQ9BTM1 129 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 MAN2B2Q9Y2E5 1009 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 SH3BP1Q9Y3L3 701 aa24.61■■□□□ 1.53
HOXB3-201ENST00000311626 FPGTO14772 594 aa24.6■■□□□ 1.53
HOXB3-201ENST00000311626 SOCS5O75159 536 aa24.6■■□□□ 1.53
HOXB3-201ENST00000311626 RECQL5O94762 991 aaPredicted RBP24.6■■□□□ 1.53
HOXB3-201ENST00000311626 ANGPTL1O95841 491 aa24.6■■□□□ 1.53
HOXB3-201ENST00000311626 AMD1P17707 334 aa24.6■■□□□ 1.53
HOXB3-201ENST00000311626 GSSP48637 474 aa24.6■■□□□ 1.53
HOXB3-201ENST00000311626 CLK3P49761 638 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms