RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PCDHB18PQ96TA0 734 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 LPIN3Q9BQK8 851 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ITPAQ9BY32 194 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ATG10Q9H0Y0 220 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 DPAGT1Q9H3H5 408 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 MEMO1Q9Y316 297 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 PPEF2O14830 753 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 KMOO15229 486 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CYP11A1P05108 521 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 DAG1Q14118 895 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SLC9B1Q4ZJI4 515 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ANKRD22Q5VYY1 191 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ZNF782Q6ZMW2 699 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 TPRG1Q6ZUI0 275 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 UBALD2Q8IYN6 164 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 AVL9Q8NBF6 648 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 PIWIL1Q96J94 861 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 GAL3ST1Q99999 423 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 YTHDF1Q9BYJ9 559 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 EQTNQ9NQ60 294 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SLC2A4RGQ9NR83 387 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TVP23BQ9NYZ1 205 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CA14Q9ULX7 337 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 A0A1W2PQH9 124 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ANXA2P2A6NMY6 339 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ANXA2P07355 339 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 HAPLN1P10915 354 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 RPS3P23396 243 aaKnown RBP eCLIP8.01□□□□□ -1.13
VPS41-202ENST00000310301 CBX2Q14781 532 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 TEAD2Q15562 447 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 HSD17B12Q53GQ0 312 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 C1orf53Q5VUE5 145 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 QSOX2Q6ZRP7 698 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 UBE2R2Q712K3 238 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 SLC26A9Q7LBE3 791 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 MRPL10Q7Z7H8 261 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 CFAP206Q8IYR0 622 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CYP4X1Q8N118 509 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 GJD3Q8N144 294 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 GPR152Q8TDT2 470 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 FOXJ1Q92949 421 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 KCTD7Q96MP8 289 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 ADAMTS10Q9H324 1103 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 PCDH18Q9HCL0 1135 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SPIN1Q9Y657 262 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 C8BP07358 591 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CDH1P12830 882 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 PEPDP12955 493 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CTPS1P17812 591 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 PTGIRP43119 386 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 CLCN2P51788 898 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 NAE1Q13564 534 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SEMA3AQ14563 771 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TBRG1Q3YBR2 411 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 KLHL22Q53GT1 634 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 FAM91A1Q658Y4 838 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 LIX1Q8N485 282 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 OR10H4Q8NGA5 316 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 OR10H5Q8NGA6 315 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 OR5B17Q8NGF7 314 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 OR14C36Q8NHC7 312 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 GATAD2BQ8WXI9 593 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 MAFIPQ8WZ33 124 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 BARD1Q99728 777 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 TRPV4Q9HBA0 871 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RC3H2Q9HBD1 1191 aaKnown RBP8.01□□□□□ -1.13
VPS41-202ENST00000310301 C3orf14Q9HBI5 128 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 POLE4Q9NR33 117 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 SPATA7Q9P0W8 599 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 FNIP2Q9P278 1114 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 TRPS1Q9UHF7 1281 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 OAZ3Q9UMX2 235 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 RABL2BQ9UNT1 228 aa8.01□□□□□ -1.13
VPS41-202ENST00000310301 PDCD5O14737 125 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PAPSS2O95340 614 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 SDHBP21912 280 aa8□□□□□ -1.13
VPS41-202ENST00000310301 ITPKAP23677 461 aa8□□□□□ -1.13
VPS41-202ENST00000310301 OXTRP30559 389 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LIMK2P53671 638 aa8□□□□□ -1.13
VPS41-202ENST00000310301 MTPNP58546 118 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CLCQ05315 142 aa8□□□□□ -1.13
VPS41-202ENST00000310301 KLF1Q13351 362 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 RHEBQ15382 184 aa8□□□□□ -1.13
VPS41-202ENST00000310301 IQCCQ4KMZ1 466 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LRRC69Q6ZNQ3 347 aa8□□□□□ -1.13
VPS41-202ENST00000310301 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 MRPL43Q8N983 215 aaKnown RBP8□□□□□ -1.13
VPS41-202ENST00000310301 COQ8AQ8NI60 647 aa8□□□□□ -1.13
VPS41-202ENST00000310301 JOSD2Q8TAC2 188 aa8□□□□□ -1.13
VPS41-202ENST00000310301 HEXDCQ8WVB3 486 aa8□□□□□ -1.13
VPS41-202ENST00000310301 XAGE5Q8WWM1 108 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CRISPLD2Q9H0B8 497 aa8□□□□□ -1.13
VPS41-202ENST00000310301 MAB21L2Q9Y586 359 aa8□□□□□ -1.13
VPS41-202ENST00000310301 KCNE2Q9Y6J6 123 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LY75O60449 1722 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LINC01553A4QN01 128 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PLD2O14939 933 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PIP5K1BO14986 540 aa8□□□□□ -1.13
VPS41-202ENST00000310301 TPST2O60704 377 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms