RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 NEIL2Q969S2 332 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 CXorf40BQ96DE9 158 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 HAUS8Q9BT25 410 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 ACTR5Q9H9F9 607 aaPredicted RBP21.81■■□□□ 1.08
IRF3-201ENST00000309877 MRGBPQ9NV56 204 aa21.81■■□□□ 1.08
IRF3-201ENST00000309877 APOBEC3BQ9UH17 382 aaKnown RBP21.81■■□□□ 1.08
IRF3-201ENST00000309877 TMEM221A6NGB7 291 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 ANKRD65E5RJM6 399 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 M0R296 226 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 SLC28A1O00337 649 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 PEX11AO75192 247 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 UNC5CO95185 931 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 ESRRAP11474 423 aaPredicted RBP21.8■■□□□ 1.08
IRF3-201ENST00000309877 SCTRP47872 440 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 RAB28P51157 221 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 PCDH1Q08174 1060 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 LCTLQ6UWM7 567 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 RNF165Q6ZSG1 346 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 OR52E1Q8NGJ3 308 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 SELENOMQ8WWX9 145 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 DNASE2BQ8WZ79 361 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 MTFMTQ96DP5 389 aaKnown RBP21.8■■□□□ 1.08
IRF3-201ENST00000309877 HBEGFQ99075 208 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 MENTQ9BUN1 341 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 TAAR2Q9P1P5 351 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 GIMAP2Q9UG22 337 aa21.8■■□□□ 1.08
IRF3-201ENST00000309877 COPG1Q9Y678 874 aaKnown RBP21.8■■□□□ 1.08
IRF3-201ENST00000309877 TRBV23OR9-2A0A075B6M9 112 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 RGS14O43566 566 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 T-ENOLP0DO92 83 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 HNF4AP41235 474 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 CSTF1Q05048 431 aaKnown RBP21.79■■□□□ 1.08
IRF3-201ENST00000309877 ATP6AP1LQ52LC2 224 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 TMPRSS11BQ86T26 416 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 OR2T11Q8NH01 316 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 SLC5A11Q8WWX8 675 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 USP7Q93009 1102 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 NRTNQ99748 197 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 PCBD2Q9H0N5 130 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 XKR8Q9H6D3 395 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 KIR3DX1Q9H7L2 352 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 CAAP1Q9H8G2 361 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 FARSBQ9NSD9 589 aaKnown RBP21.79■■□□□ 1.08
IRF3-201ENST00000309877 TAGLN3Q9UI15 199 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 PRAMEF33A0A0G2JMD5 474 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 A6NCN8 305 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 CALB2P22676 271 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 ADSLP30566 484 aaPredicted RBP21.79■■□□□ 1.08
IRF3-201ENST00000309877 CASP2P42575 452 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 KLF10Q13118 480 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 IMPG1Q17R60 797 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 PRRT3Q5FWE3 981 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 GRHL2Q6ISB3 625 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 SLCO4C1Q6ZQN7 724 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 Q6ZSR9 355 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 SPATA19Q7Z5L4 167 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 LONP2Q86WA8 852 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 C1orf210Q8IVY1 113 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 C1orf216Q8TAB5 229 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 PTCD3Q96EY7 689 aaKnown RBP21.79■■□□□ 1.08
IRF3-201ENST00000309877 ZNF385DQ9H6B1 395 aa21.79■■□□□ 1.08
IRF3-201ENST00000309877 ZNF624Q9P2J8 865 aaPredicted RBP21.79■■□□□ 1.08
IRF3-201ENST00000309877 PLXND1Q9Y4D7 1925 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 SLC22A2O15244 555 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 HNRNPCL1O60812 293 aaKnown RBP21.78■■□□□ 1.08
IRF3-201ENST00000309877 VARSP26640 1264 aaKnown RBP21.78■■□□□ 1.08
IRF3-201ENST00000309877 PKLRP30613 574 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 RASSF2P50749 326 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 C1orf61Q13536 156 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 SQLEQ14534 574 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 NR6A1Q15406 480 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 FRG2Q64ET8 278 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 IYDQ6PHW0 289 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 TRIM46Q7Z4K8 759 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 TRIM48Q8IWZ4 208 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 OR2L8Q8NGY9 312 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 CMTM5Q96DZ9 223 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 FRG2BQ96QU4 278 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 ACAT2Q9BWD1 397 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 TAC3Q9UHF0 121 aa21.78■■□□□ 1.08
IRF3-201ENST00000309877 PDYNP01213 254 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 CSF2P04141 144 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 CELA2BP08218 269 aaPredicted RBP21.77■■□□□ 1.08
IRF3-201ENST00000309877 PRR35P0CG20 571 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 C1GALT1C1LP0DN25 315 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 TDGF1P13385 188 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 CD22P20273 847 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 SLC19A1P41440 591 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 C21orf59P57076 290 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 STX1BP61266 288 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 NCALDP61601 193 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 CATSPEREQ5SY80 951 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 ATG9BQ674R7 924 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 OGFOD2Q6N063 350 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 NXPE4Q6UWF7 544 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 C17orf64Q86WR6 236 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 SFRP1Q8N474 314 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 LINC01555Q8NAE3 123 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 HMGCLL1Q8TB92 370 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 PPP3R2Q96LZ3 170 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms