RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 POLR2IP36954 125 aaKnown RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CLCN2P51788 898 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ACSM2AQ08AH3 577 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 STARD3Q14849 445 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 KCTD21Q4G0X4 260 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 IRAK1BP1Q5VVH5 260 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ACSM2BQ68CK6 577 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 NOXRED1Q6NXP6 359 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 TMEM26Q6ZUK4 368 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 NECAB2Q7Z6G3 386 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 RIMKLAQ8IXN7 391 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 SYTL1Q8IYJ3 562 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CLECL1Q8IZS7 167 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 C2orf73Q8N5S3 287 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 PAPD5Q8NDF8 572 aaKnown RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 UBTD2Q8WUN7 234 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 VOPP1Q96AW1 172 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 AP2M1Q96CW1 435 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 KAT8Q9H7Z6 458 aaKnown RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ERVW-1Q9UQF0 538 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 AGAP14A8MT82 685 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ARHGEF33A8MVX0 844 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 hCG_2039718K7EN88 272 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CYP2A6P11509 494 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 HLA-EP13747 358 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 NR4A1P22736 598 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ALDH3B2P48448 385 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 METAP1P53582 386 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CLDN8P56748 225 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 LILRA6Q6PI73 481 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ELMSAN1Q6PJG2 1045 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ZFYVE19Q96K21 471 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 NAA50Q9GZZ1 169 aaKnown RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 GNG14A0A1W2PPG7 69 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 UPK1AO00322 258 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 SAP18O00422 153 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 NUAK1O60285 661 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 SLC16A8O95907 504 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 ALPLP05186 524 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 PDHA2P29803 388 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 VIPR1P32241 457 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 CDK9P50750 372 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 TUBA4AP68366 448 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 TMEM220Q6QAJ8 160 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 THOC6Q86W42 341 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 TRAPPC5Q8IUR0 188 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF555Q8NEP9 628 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 FRS2Q8WU20 508 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 SNX19Q92543 992 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 C12orf43Q96C57 262 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 ISOC1Q96CN7 298 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 CPEB1Q9BZB8 566 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 PAIP1Q9H074 479 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 CXXC1Q9P0U4 656 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 SH3BP4Q9P0V3 963 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 DNAJB9Q9UBS3 223 aa11.21□□□□□ -0.61
PTPN2-201ENST00000309660 WARS2Q9UGM6 360 aaKnown RBP11.21□□□□□ -0.61
PTPN2-201ENST00000309660 FPGTO14772 594 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 EPCAMP16422 314 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 PIGAP37287 484 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 MEP1AQ16819 746 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 BRAT1Q6PJG6 821 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 PRR23BQ6ZRT6 265 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 TMPRSS11BQ86T26 416 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 EID3Q8N140 333 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 SGK2Q9HBY8 427 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 MAN1A2O60476 641 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 ERN1O75460 977 aaKnown RBP11.21□□□□□ -0.62
PTPN2-201ENST00000309660 FTH1P02794 183 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 CTSLP07711 333 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 PRPS2P11908 318 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 PTPN2P17706 415 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 MAPK1P28482 360 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 STT3AP46977 705 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 GSSP48637 474 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 HNMTP50135 292 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 PFN3P60673 137 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 CREMQ03060 361 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 DOC2AQ14183 400 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 RAB39AQ14964 217 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.21□□□□□ -0.62
PTPN2-201ENST00000309660 AGTRAPQ6RW13 159 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 C8orf59Q8N0T1 100 aaPredicted RBP11.21□□□□□ -0.62
PTPN2-201ENST00000309660 AADATQ8N5Z0 425 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 POF1BQ8WVV4 589 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 TPD52L3Q96J77 140 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 DGCR6LQ9BY27 220 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 KCNH6Q9H252 994 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 AASSQ9UDR5 926 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 BAG5Q9UL15 447 aa11.21□□□□□ -0.62
PTPN2-201ENST00000309660 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 SCELO95171 688 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 BMP10O95393 424 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 TIMP1P01033 207 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 TIMP2P16035 220 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 ENGP17813 658 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 CD22P20273 847 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms