RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 KPNA3O00505 521 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 UMPSP11172 480 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 COX7A2P14406 83 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 HOXD9P28356 352 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 CTSKP43235 329 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 MGAT3Q09327 533 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 SELPLGQ14242 412 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 ATP6AP1Q15904 470 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 INO80DQ53TQ3 878 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 RNASE12Q5GAN4 147 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 C6orf136Q5SQH8 315 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 CES5AQ6NT32 575 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 MRPL10Q7Z7H8 261 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 SLC34A3Q8N130 599 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 FUBP1Q96AE4 644 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 MYO19Q96H55 970 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 VPS35Q96QK1 796 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 WRAP53Q9BUR4 548 aaKnown RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 IRF2BPLQ9H1B7 796 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 PAK1IP1Q9NWT1 392 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 PRSS21Q9Y6M0 314 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF840PA6NDX5 716 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 LRG1P02750 347 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 IL18R1Q13478 541 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 ABRAXAS2Q15018 415 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 DDI2Q5TDH0 399 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 Q96MT0 163 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 IL4I1Q96RQ9 567 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 FAM124BQ9H5Z6 455 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM39AQ9NV64 488 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 HCFC1R1Q9NWW0 138 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 RAPGEFL1Q9UHV5 662 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 YIPF1Q9Y548 306 aa12.35□□□□□ -0.43
RETREG3-201ENST00000309428 A0A1B0GVM2 712 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PIPSLA2A3N6 862 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SLC1A7O00341 560 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PEX11BO96011 259 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 KRT6AP02538 564 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 KRT6BP04259 564 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 CYP11A1P05108 521 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 GPX3P22352 226 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 HOXD10P28358 340 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 KRT6CP48668 564 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 ERVPABLB-1P60509 514 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 TIGD6Q17RP2 521 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SMU1Q2TAY7 513 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SDE2Q6IQ49 451 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 FAM86B1Q8N7N1 296 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 UBE2FQ969M7 185 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 ZUFSPQ96AP4 578 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SLC39A13Q96H72 371 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 NEURL2Q9BR09 285 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 UCKL1Q9NWZ5 548 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 CNOT11Q9UKZ1 510 aaKnown RBP12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PLK4O00444 970 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PER2O15055 1255 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 RFPL2O75678 378 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 OAZ2O95190 189 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 UROSP10746 265 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF7P17097 686 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-201ENST00000309428 WASP42768 502 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 TTPAP49638 278 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 ERVK-8P63133 956 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PYDC2Q56P42 97 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 C19orf18Q8NEA5 215 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 OR2T11Q8NH01 316 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 WDR36Q8NI36 951 aaKnown RBP12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SUN5Q8TC36 379 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 LSM7Q9UK45 103 aaKnown RBP12.34□□□□□ -0.43
RETREG3-201ENST00000309428 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 NEU3Q9UQ49 428 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 BRWD1Q9NSI6 2320 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 C5orf58C9J3I9 102 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 H7C4K7 107 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PLOD3O60568 738 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 CLDN11O75508 207 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SEMA3DO95025 777 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 MTHFD2P13995 350 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SLC16A1P53985 500 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 EPHB3P54753 998 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 GTF2H2Q13888 395 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 GTF2H2CQ6P1K8 395 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 BLOC1S3Q6QNY0 202 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 FAM131AQ6UXB0 335 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 SPATA19Q7Z5L4 167 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 TMEM246Q9BRR3 403 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 PAQR5Q9NXK6 330 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-201ENST00000309428 KLHL3Q9UH77 587 aa12.34□□□□□ -0.43
RETREG3-201ENST00000309428 MRPS7Q9Y2R9 242 aaKnown RBP12.34□□□□□ -0.43
RETREG3-201ENST00000309428 OR6C75A6NL08 312 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 TARM1B6A8C7 271 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 INPPL1O15357 1258 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms