RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 POLR3GO15318 223 aaPredicted RBP16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 ITM2AO43736 263 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 FOXD2O60548 495 aaPredicted RBP16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 PNLIPP16233 465 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 CKMT2P17540 419 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 AMD1P17707 334 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 CD1CP29017 333 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 GPR3P46089 330 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 LSSP48449 732 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 CCL7P80098 99 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 GUCY1A3Q02108 690 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 GTF2H2Q13888 395 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 INAVAQ3KP66 663 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 GTF2H2CQ6P1K8 395 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 USP53Q70EK8 1073 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 LRRC70Q7Z2Q7 622 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 SPRED1Q7Z699 444 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 PIP4P1Q86T03 277 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 SNX31Q8N9S9 440 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 IFI44Q8TCB0 444 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 ZNF75CPQ92670 426 aaPredicted RBP16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 OR2A14Q96R47 310 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 C20orf27Q9GZN8 174 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 ABCG4Q9H172 646 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 SEMA4BQ9NPR2 832 aaPredicted RBP16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 CCDC177Q9NQR7 707 aaPredicted RBP16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 OPTCQ9UBM4 332 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 FTSJ1Q9UET6 329 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 TAC3Q9UHF0 121 aa16.5■□□□□ 0.23
NDUFA11-201ENST00000308961 A0A1W2PQM1 296 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 UBFD1O14562 309 aaKnown RBP16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 OR7A17O14581 309 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 LYPLA1O75608 230 aaPredicted RBP16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 SERPINE1P05121 402 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 NEFHP12036 1026 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 UGT2B7P16662 529 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 MDH1P40925 334 aaKnown RBP16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 DUSP3P51452 185 aaPredicted RBP16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 EPHA4P54764 986 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 CLCQ05315 142 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 BST1Q10588 318 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 PDK4Q16654 411 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 AMZ1Q400G9 498 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 THEMIS2Q5TEJ8 643 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 PRAMEF13Q5VWM6 474 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 LCTLQ6UWM7 567 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 TRIM73Q86UV7 250 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 OR6C4Q8NGE1 309 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 TRPC4APQ8TEL6 797 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 MIPEPQ99797 713 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 CCDC3Q9BQI4 270 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 NOL11Q9H8H0 719 aaKnown RBP16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 MANSC1Q9H8J5 431 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 EVA1BQ9NVM1 165 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 KLHL20Q9Y2M5 609 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 PCDHB11Q9Y5F2 797 aa16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 ASCC3Q8N3C0 2202 aaKnown RBP16.49■□□□□ 0.23
NDUFA11-201ENST00000308961 COL5A1P20908 1838 aaPredicted RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 GSAPA4D1B5 854 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 NPHS1O60500 1241 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 CHRNGP07510 517 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 HOXB3P14651 431 aaPredicted RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 ACP1P24666 158 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 PRDX3P30048 256 aaKnown RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 CSF2RBP32927 897 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 GFERP55789 205 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 CDC16Q13042 620 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 STX3Q13277 289 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 KIR2DS3Q14952 304 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 CFAP157Q5JU67 520 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 KIAA1614Q5VZ46 1190 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 METTL2BQ6P1Q9 378 aaKnown RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 FRMD7Q6ZUT3 714 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 OOSP2Q86WS3 158 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 KIAA2013Q8IYS2 634 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 OR52B6Q8NGF0 335 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 PPP1R14CQ8TAE6 165 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 PPP4R1Q8TF05 950 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 DYDC1Q8WWB3 177 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 NCSTNQ92542 709 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 NAT6Q93015 286 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 NEIL2Q969S2 332 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 PRR11Q96HE9 360 aaPredicted RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 CNDP1Q96KN2 507 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 SHCBP1LQ9BZQ2 653 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 IPPKQ9H8X2 491 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 TNFRSF12AQ9NP84 129 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 SLC6A20Q9NP91 592 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 CUEDC1Q9NWM3 386 aaPredicted RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 TMEM9Q9P0T7 183 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 ZNF225Q9UK10 706 aa16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 ATXN7L1Q9ULK2 861 aaPredicted RBP16.48■□□□□ 0.23
NDUFA11-201ENST00000308961 IGKV1-8A0A0C4DH67 115 aa16.47■□□□□ 0.23
NDUFA11-201ENST00000308961 C2orf74A8MZ97 194 aa16.47■□□□□ 0.23
NDUFA11-201ENST00000308961 E7EQ34 232 aa16.47■□□□□ 0.23
NDUFA11-201ENST00000308961 GFRA3O60609 400 aa16.47■□□□□ 0.23
NDUFA11-201ENST00000308961 EPB42P16452 691 aa16.47■□□□□ 0.23
NDUFA11-201ENST00000308961 CCND1P24385 295 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms