RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 SERINC3Q13530 473 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 ASCC1Q8N9N2 400 aaKnown RBP13.14□□□□□ -0.31
SEC23A-201ENST00000307712 OR6Q1Q8NGQ2 317 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 TMEM203Q969S6 136 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 NEURL2Q9BR09 285 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 SLC30A2Q9BRI3 323 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 CPNE5Q9HCH3 593 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 MKLN1Q9UL63 735 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 SNX7Q9UNH6 387 aa13.14□□□□□ -0.31
SEC23A-201ENST00000307712 A0A0U1RQS6 177 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 OR6C70A6NIJ9 312 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 LDB2O43679 373 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 CAPN15O75808 1086 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 C9P02748 559 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 NR2F6P10588 404 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ST3GAL4Q11206 333 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TMEM207Q6UWW9 146 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TPGS1Q6ZTW0 290 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 CSGALNACT1Q8TDX6 532 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 NT5C3BQ969T7 300 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TTYH2Q9BSA4 534 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 POLR2J2Q9GZM3 115 aaKnown RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ING3Q9NXR8 418 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 KCTD5Q9NXV2 234 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ANKMY1Q9P2S6 941 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 IGSF6O95976 241 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 EPOP01588 193 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 PPIBP23284 216 aaKnown RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 SERPINA4P29622 427 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF45Q02386 682 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TBRG1Q3YBR2 411 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TRIM40Q6P9F5 258 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 C2orf49Q9BVC5 232 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ZBTB20Q9HC78 741 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 NLE1Q9NVX2 485 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 MIOSQ9NXC5 875 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 PCDHB7Q9Y5E2 793 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 CASKO14936 926 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 GPR32O75388 356 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 CATP04040 527 aaKnown RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 NPRL3Q12980 569 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 PLD1Q13393 1074 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF181Q2M3W8 571 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 OTUD1Q5VV17 481 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ANKRD34AQ69YU3 496 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ELMSAN1Q6PJG2 1045 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 DHRS4L2Q6PKH6 230 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 FAM86B1Q8N7N1 296 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF675Q8TD23 568 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 KCNJ9Q92806 393 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 SPRTNQ9H040 489 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TMLHEQ9NVH6 421 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 TMEM248Q9NWD8 314 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 ADAM30Q9UKF2 790 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 CORO2BQ9UQ03 480 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 CARD8Q9Y2G2 431 aa13.13□□□□□ -0.31
SEC23A-201ENST00000307712 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 DNTTP04053 509 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 FAM163BP0C2L3 166 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 HRH2P25021 359 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 RAB25P57735 213 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 RPS7P62081 194 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 PURAQ00577 322 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 CD300CQ08708 224 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 NAE1Q13564 534 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ATG9BQ674R7 924 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 CCDC149Q6ZUS6 474 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 MUL1Q969V5 352 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF486Q96H40 463 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 DPH2Q9BQC3 489 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SIAEQ9HAT2 523 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 PAQR5Q9NXK6 330 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ANGPT4Q9Y264 503 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 FADS2P1A8MWK0 482 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 H7C4K7 107 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 GJB3O75712 270 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 UPK1BO75841 260 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 AKR1A1P14550 325 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 RCVRNP35243 200 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ADRA1AP35348 466 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 PSMD8P48556 350 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SRSF11Q05519 484 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 COX10Q12887 443 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SEMA3BQ13214 749 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms