RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 LCTLQ6UWM7 567 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 Q6ZSR9 355 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 TRIM46Q7Z4K8 759 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 GPBAR1Q8TDU6 330 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SMPDL3AQ92484 453 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 NEIL2Q969S2 332 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SH3KBP1Q96B97 665 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 KLHL29Q96CT2 875 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 MARK4Q96L34 752 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 MIR1-1HGQ9H1L0 117 aa16.97■□□□□ 0.31
KRT28-201ENST00000306658 SCHIP1Q9P0W5 487 aaPredicted RBP16.97■□□□□ 0.31
KRT28-201ENST00000306658 CACNA1IQ9P0X4 2223 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PCM1Q15154 2024 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 LRP4O75096 1905 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PRAMEF4O60810 478 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 F3P13726 295 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 CTSEP14091 401 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 EZRP15311 586 aaKnown RBP16.96■□□□□ 0.31
KRT28-201ENST00000306658 RAB28P51157 221 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 NAA25Q14CX7 972 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 TCEA2Q15560 299 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 GSTA3Q16772 222 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 IMPG1Q17R60 797 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 SGO1Q5FBB7 561 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PRAMEF14Q5SWL7 426 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PRAMEF9Q5VWM5 478 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PRAMEF13Q5VWM6 474 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 FRG2Q64ET8 278 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 GRHL2Q6ISB3 625 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 SLCO4C1Q6ZQN7 724 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 NRROSQ86YC3 692 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PHACTR4Q8IZ21 702 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 OR2T11Q8NH01 316 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 SELENOMQ8WWX9 145 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 PPP3R2Q96LZ3 170 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 NECAB3Q96P71 396 aaPredicted RBP16.96■□□□□ 0.31
KRT28-201ENST00000306658 FRG2BQ96QU4 278 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 MENTQ9BUN1 341 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 DUSP15Q9H1R2 295 aaPredicted RBP16.96■□□□□ 0.31
KRT28-201ENST00000306658 EHD1Q9H4M9 534 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 SLCO1B1Q9Y6L6 691 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 ABCA7Q8IZY2 2146 aa16.96■□□□□ 0.31
KRT28-201ENST00000306658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 A0A1W2PR77 199 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 DNAJC8O75937 253 aaPredicted RBP16.95■□□□□ 0.3
KRT28-201ENST00000306658 THRAP10827 490 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 IDO1P14902 403 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 MAOBP27338 520 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 PIK3R1P27986 724 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 PTPN4P29074 926 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 CORO7P57737 925 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 ERVK-8P63133 956 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 E2F2Q14209 437 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 NR6A1Q15406 480 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 PAGE2BQ5JRK9 111 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 WDR45BQ5MNZ6 344 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 C6orf136Q5SQH8 315 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 ATG9BQ674R7 924 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 TMEFF1Q8IYR6 380 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 HMGCLL1Q8TB92 370 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 SLC5A11Q8WWX8 675 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 CXorf40BQ96DE9 158 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 HBEGFQ99075 208 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 EFCAB11Q9BUY7 163 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 KIR3DX1Q9H7L2 352 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 FARSBQ9NSD9 589 aaKnown RBP16.95■□□□□ 0.3
KRT28-201ENST00000306658 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.95■□□□□ 0.3
KRT28-201ENST00000306658 GIMAP2Q9UG22 337 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 PCDHGA11Q9Y5H2 935 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 CEP192Q8TEP8 1941 aa16.95■□□□□ 0.3
KRT28-201ENST00000306658 SERTM1A2A2V5 107 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 H0YIV9 168 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 TLR4O00206 839 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 LSM1O15116 133 aaKnown RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 PDYNP01213 254 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 ALDOCP09972 364 aaKnown RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 C1GALT1C1LP0DN25 315 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 COX4I1P13073 169 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 BCKDHBP21953 392 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 DMWDQ09019 674 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 LAPTM5Q13571 262 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 RPS6KA2Q15349 733 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 KIF19Q2TAC6 998 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 SMU1Q2TAY7 513 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 ZNF542PQ5EBM4 170 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 ASRGL1Q7L266 308 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 TMPRSS11BQ86T26 416 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 SFRP1Q8N474 314 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 C2orf73Q8N5S3 287 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 LMNTD1Q8N9Z9 388 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 FNDC5Q8NAU1 212 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 OR52E1Q8NGJ3 308 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 OR2L8Q8NGY9 312 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 RP9Q8TA86 221 aaKnown RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 SLC7A6OSQ96CW6 309 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 REPS1Q96D71 796 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 MTFMTQ96DP5 389 aaKnown RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 WDR34Q96EX3 536 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 LRMDAQ9H2I8 198 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 TM9SF3Q9HD45 589 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms