RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 HDAC2Q92769 488 aaKnown RBP6.49□□□□□ -1.37
TMC1-201ENST00000297784 HLA-CQ95604 372 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 ARRDC3Q96B67 414 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 MARK4Q96L34 752 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 P2RY13Q9BPV8 354 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 FUNDC2Q9BWH2 189 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 MEAF6Q9HAF1 191 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 NECTIN3Q9NQS3 549 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 PRDM6Q9NQX0 595 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 NPAP1Q9NZP6 1156 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 B4GALT6Q9UBX8 382 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 MBD1Q9UIS9 605 aaPredicted RBP6.49□□□□□ -1.37
TMC1-201ENST00000297784 TMPRSS11EQ9UL52 423 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 CRYL1Q9Y2S2 319 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 ANGPTL3Q9Y5C1 460 aa6.49□□□□□ -1.37
TMC1-201ENST00000297784 EDDM13A0A1B0GTR0 161 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 LOC105371267A0A1B0GV96 52 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CLIC3O95833 236 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 KRT6AP02538 564 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 KRT6BP04259 564 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 UMPSP11172 480 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 BMP4P12644 408 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 IL9P15248 144 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CRHBPP24387 322 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 MC4RP32245 332 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SERPINB10P48595 397 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SLC7A2P52569 658 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 PPP5CP53041 499 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SEC13P55735 322 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 STX1BP61266 288 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 DNASE1L3Q13609 305 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 PON2Q15165 354 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 HIST2H2ACQ16777 129 aaPredicted RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 LDLRAP1Q5SW96 308 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 PRPF38BQ5VTL8 546 aaKnown RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 BRAT1Q6PJG6 821 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SERPINA13PQ6UXR4 307 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 PRSS48Q7RTY5 328 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 HSD11B1LQ7Z5J1 315 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 ZBTB46Q86UZ6 589 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 BPHLQ86WA6 291 aaPredicted RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 TMIEQ8NEW7 156 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 FAM110BQ8TC76 370 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 HCAR2Q8TDS4 363 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 LRIG1Q96JA1 1093 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 GPR78Q96P69 363 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SNX18Q96RF0 628 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 NEK6Q9HC98 313 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 PCDH12Q9NPG4 1184 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CATSPERZQ9NTU4 200 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 GALPQ9UBC7 116 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 ITM2BQ9Y287 266 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 STON1Q9Y6Q2 735 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 NUMA1Q14980 2115 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 A0A1W2PQF6 199 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 H0Y858 1186 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 EPHX1P07099 455 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CD72P21854 359 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 DRD3P35462 400 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CASP3P42574 277 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 WASP42768 502 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 TNFRSF4P43489 277 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 MAPK10P53779 464 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 DNAJB13P59910 316 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 ST8SIA6P61647 398 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 ELAVL3Q14576 367 aaKnown RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 DGUOKQ16854 277 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 LEXMQ3ZCV2 418 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 AGKQ53H12 422 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 GPR153Q6NV75 609 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SLCO6A1Q86UG4 719 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SLC41A1Q8IVJ1 513 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 TBC1D21Q8IYX1 336 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CENPLQ8N0S6 344 aaPredicted RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 ZNF687Q8N1G0 1237 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 MINDY1Q8N5J2 469 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 IL17RCQ8NAC3 791 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.48□□□□□ -1.37
TMC1-201ENST00000297784 PPP1R36Q96LQ0 422 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 RDH12Q96NR8 316 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 C19orf43Q9BQ61 176 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 GPR63Q9BZJ6 419 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 TRIT1Q9H3H1 467 aaKnown RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 MARCH7Q9H992 704 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SLC39A10Q9ULF5 831 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 SATB2Q9UPW6 733 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 FNDC3AQ9Y2H6 1198 aaKnown RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 SSUH2Q9Y2M2 353 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 TRBV5-4A0A0C4DH59 114 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 STX7O15400 261 aaKnown RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 APODP05090 189 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 GSNP06396 782 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 GFAPP14136 432 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 FOSL2P15408 326 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 NR4A1P22736 598 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 HTR1BP28222 390 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 TIE1P35590 1138 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 CCR10P46092 362 aa6.48□□□□□ -1.37
TMC1-201ENST00000297784 YAP1P46937 504 aaKnown RBP6.48□□□□□ -1.37
TMC1-201ENST00000297784 NAGLUP54802 743 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms