RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TRPM4Q8TD43 1214 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 WACQ9BTA9 647 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 MTRRQ9UBK8 725 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ELOA3DA6NLF2 546 aaPredicted RBP15.79■□□□□ 0.12
SSRP1-202ENST00000293880 NDST3O95803 873 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PRKACAP17612 351 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 CREB5Q02930 508 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 MAPK14Q16539 360 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ELOA3BQ3SY89 546 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ELOA3Q8NG57 546 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 TFAP2BQ92481 460 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ZSWIM3Q96MP5 696 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 MRPS30Q9NP92 439 aaKnown RBP15.79■□□□□ 0.12
SSRP1-202ENST00000293880 FARSBQ9NSD9 589 aaKnown RBP15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PTTG2Q9NZH5 202 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 AJAP1Q9UKB5 411 aaPredicted RBP15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ABLIM1O14639 778 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PPEF2O14830 753 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 CYP11A1P05108 521 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ALPIP09923 528 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 COL6A2P12110 1019 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 HK1P19367 917 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 IDSP22304 550 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 SLC18A2Q05940 514 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ZNF311Q5JNZ3 666 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 XKRXQ6PP77 449 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 TMED4Q7Z7H5 227 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 CCDC28AQ8IWP9 274 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 CERS5Q8N5B7 392 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 LCN9Q8WX39 176 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 TMBIM1Q969X1 311 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PKP4Q99569 1192 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ANKRA2Q9H9E1 313 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PAK6Q9NQU5 681 aaPredicted RBP15.79■□□□□ 0.12
SSRP1-202ENST00000293880 NANSQ9NR45 359 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PCDHGC3Q9UN70 934 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 PLEKHA6Q9Y2H5 1048 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ZNF510Q9Y2H8 683 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 TRAV6A0A075B6T7 132 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 B3GALT2O43825 422 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 SOX14O95416 240 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 BCHEP06276 602 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ELNP15502 786 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ZNF16P17020 682 aaPredicted RBP15.79■□□□□ 0.12
SSRP1-202ENST00000293880 CKMT2P17540 419 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ENGP17813 658 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 MMP8P22894 467 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 CLCN7P51798 805 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 AIF1P55008 147 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 HMGCS1Q01581 520 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 SLC37A3Q8NCC5 494 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 TMCO6Q96DC7 493 aa15.79■□□□□ 0.12
SSRP1-202ENST00000293880 ARPC2O15144 300 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 TREHO43280 583 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PCDHGA12O60330 932 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 MTX2O75431 263 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 BDKRB1P46663 353 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ARCN1P48444 511 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 MLLT6P55198 1093 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 RPS14P62263 151 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SP3Q02447 781 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 LCLAT1Q6UWP7 414 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 TOMM5Q8N4H5 51 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 C4orf32Q8N8J7 132 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 OR2AG1Q9H205 316 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 CDH7Q9ULB5 785 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 CXorf49A8MYA2 514 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 GNRH1P01148 92 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 HOXC12P31275 282 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 MMP14P50281 582 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ATXN7L3Q14CW9 347 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PRSS55Q6UWB4 352 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ARL14EPQ8N8R7 260 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SGCDQ92629 289 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 DUSP26Q9BV47 211 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 DUS2Q9NX74 493 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 GNG8Q9UK08 70 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 USP32Q8NFA0 1604 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 C5orf60A6NFR6 353 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ZNF705EA8MWA4 302 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 BTBD19C9JJ37 291 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PRKACGP22612 351 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 GRK1Q15835 563 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 NDUFA9Q16795 377 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 DQX1Q8TE96 717 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 STON2Q8WXE9 905 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SLC7A6OSQ96CW6 309 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PHPT1Q9NRX4 125 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 EVA1BQ9NVM1 165 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 DNAJB9Q9UBS3 223 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 TRIM64A6NGJ6 449 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 RENP00797 406 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 OR3A3P47888 321 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 OR3A2P47893 321 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 CDKN1CP49918 316 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms