RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 C2CD4BA6NLJ0 364 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 LINC00271P0C7V0 271 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ACADMP11310 421 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 UNGP13051 313 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 RHOQP17081 205 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TUBA1BP68363 451 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 GNA12Q03113 381 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CTC1Q2NKJ3 1217 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ALG11Q2TAA5 492 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SYCE2Q6PIF2 218 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CD300LGQ6UXG3 332 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TUBA1AQ71U36 451 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF248Q8NDW4 579 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PHC3Q8NDX5 983 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 VANGL1Q8TAA9 524 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 BPIFB1Q8TDL5 484 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SUSD6Q92537 303 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 BTN2A3PQ96KV6 586 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 FCRL4Q96PJ5 515 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TLR5O60602 858 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLDN11O75508 207 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ARFIP1P53367 373 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CDH12P55289 794 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TFF2Q03403 129 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SRSF11Q05519 484 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TUBA3CQ13748 450 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PDGFRLQ15198 375 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TIGD6Q17RP2 521 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 FBXO43Q4G163 708 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 RTL4Q6ZR62 310 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 RD3Q7Z3Z2 195 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 UBALD2Q8IYN6 164 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 DCAKDQ8WVC6 231 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CANT1Q8WVQ1 401 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 IL1RAPQ9NPH3 570 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 DNMT3BQ9UBC3 853 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CKLFQ9UBR5 152 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 OAZ3Q9UMX2 235 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 GRIP1Q9Y3R0 1128 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 C9JVG2 144 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 OR10H2O60403 315 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC25A14O95258 325 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 IFNA7P01567 189 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PEPDP12955 493 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CTPS1P17812 591 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SSR2P43308 183 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PNLIPRP1P54315 467 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 RHDQ02161 417 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 MXD1Q05195 221 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC9B1Q4ZJI4 515 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 KLHL22Q53GT1 634 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 NIPA2Q8N8Q9 360 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF420Q8TAQ5 688 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 RAD51AP1Q96B01 352 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 MYO19Q96H55 970 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 DCSTAMPQ9H295 470 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 OXSMQ9NWU1 459 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PCDHGB3Q9Y5G1 929 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 AGRPO00253 132 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRLP01236 227 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ERVK-8P63133 956 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 RGS1Q08116 209 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 FNDC3BQ53EP0 1204 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ESRP1Q6NXG1 681 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 LRRTM3Q86VH5 581 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 DENND1CQ8IV53 801 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLITRK4Q8IW52 837 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF433Q8N7K0 673 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 GRIN3AQ8TCU5 1115 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 ADAMTS15Q8TE58 950 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 CXorf40AQ8TE69 158 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 AP2M1Q96CW1 435 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 MED11Q9P086 117 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 TBC1D24Q9ULP9 559 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRELID1Q9Y255 219 aa11.57□□□□□ -0.56
SYNGAP1-201ENST00000293748 MATN3O15232 486 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 TBL1XO60907 577 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 OR4F21O95013 312 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ANXA4P09525 319 aaPredicted RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 S100GP29377 79 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 TSC22D1Q15714 1073 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 CRTC2Q53ET0 693 aaPredicted RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 PITRM1Q5JRX3 1037 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 RAET1GQ6H3X3 334 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ADNP2Q6IQ32 1131 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 OR52J3Q8NH60 311 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 PCDH19Q8TAB3 1148 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 UFD1Q92890 307 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 FGF13Q92913 245 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 C1orf109Q9NX04 203 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 UPB1Q9UBR1 384 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 RPL36Q9Y3U8 105 aaKnown RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAGEB17A8MXT2 336 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ACOX3O15254 700 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLPXO76031 633 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 NMBRP28336 390 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC15A1P46059 708 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 CACNG1Q06432 222 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 FOXM1Q08050 763 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms