RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 STATHP02808 62 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 CBSLP0DN79 551 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 OTX2P32243 289 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 RORAP35398 523 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 CBSP35520 551 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 PTGIRP43119 386 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 MAGEA3P43357 314 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 PGGT1BP53609 377 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 YBX1P67809 324 aaKnown RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 C2orf54Q08AI8 447 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 RBM20Q5T481 1227 aaKnown RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 MLIPQ5VWP3 458 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF549Q6P9A3 640 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 SUSD1Q6UWL2 747 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 PIWIL4Q7Z3Z4 852 aaKnown RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 ADCK2Q7Z695 626 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 IGDCC3Q8IVU1 814 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 DTWD1Q8N5C7 304 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 DENND1AQ8TEH3 1009 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 RAD51AP1Q96B01 352 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 TCTN2Q96GX1 697 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 SIGLEC10Q96LC7 697 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 FCRL4Q96PJ5 515 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 KRT12Q99456 494 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 MENTQ9BUN1 341 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 RAB11FIP5Q9BXF6 653 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 TRIM55Q9BYV6 548 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 SLC25A18Q9H1K4 315 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 INTS10Q9NVR2 710 aaKnown RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 GEMIN8Q9NWZ8 242 aaKnown RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 STOX2Q9P2F5 926 aaPredicted RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 FBXO5Q9UKT4 447 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 FARSAQ9Y285 508 aaKnown RBP9.4□□□□□ -0.9
CCDC58-201ENST00000291458 TP53TG5Q9Y2B4 290 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 SAR1BQ9Y6B6 198 aa9.4□□□□□ -0.9
CCDC58-201ENST00000291458 PCM1Q15154 2024 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 A0A0J9YVX5 310 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 K7EM74 188 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 VPS26AO75436 327 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 RFPL1O75677 317 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 HAUS5O94927 633 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 CATP04040 527 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 EIF2S1P05198 315 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 AGXTP21549 392 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 ALAS2P22557 587 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 RPA3P35244 121 aaPredicted RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 ELK3P41970 407 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 PAFAH1B1P43034 410 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 GABRA4P48169 554 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 CARSP49589 748 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 CLCN7P51798 805 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 ITGA8P53708 1063 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 VSX2P58304 361 aaPredicted RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 RAPSNQ13702 412 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 ATP1A4Q13733 1029 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 TTLL9Q3SXZ7 439 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 PAPD7Q5XG87 772 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 FCRL6Q6DN72 434 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 FIGLAQ6QHK4 219 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 MBOAT1Q6ZNC8 495 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 SYVN1Q86TM6 617 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 CREG2Q8IUH2 290 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 TMEM151BQ8IW70 566 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 DNAJC22Q8N4W6 341 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 CD200R1Q8TD46 325 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 CALML6Q8TD86 181 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 ALKBH8Q96BT7 664 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 ABHD17AQ96GS6 310 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 TCF12Q99081 682 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 SELENOSQ9BQE4 189 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 NDC1Q9BTX1 674 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 DPH5Q9H2P9 285 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 INTS7Q9NVH2 962 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 EURLQ9NYK6 297 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 TAC3Q9UHF0 121 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 PCYOX1Q9UHG3 505 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 TRMT6Q9UJA5 497 aaKnown RBP9.39□□□□□ -0.91
CCDC58-201ENST00000291458 PLCL2Q9UPR0 1127 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 PCDHGA6Q9Y5G7 932 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
CCDC58-201ENST00000291458 MDC1Q14676 2089 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 A6NL46 340 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 EFCAB8A8MWE9 144 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 J3QKU1 62 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 MASP2O00187 686 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 ALOX12BO75342 701 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SAT1P21673 171 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 ATP5DP30049 168 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 CCNFP41002 786 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 PMS2P54278 862 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 GBX1Q14549 363 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 FASTKD3Q14CZ7 662 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 NCF4Q15080 339 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 HIF1AQ16665 826 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms