RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 RAB30Q15771 203 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 PRAMEF14Q5SWL7 426 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 FAM219BQ5XKK7 198 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 TRIM69Q86WT6 500 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 OR4K1Q8NGD4 311 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 MGME1Q9BQP7 344 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 REXO4Q9GZR2 422 aaKnown RBP13.97□□□□□ -0.17
TMEM47-201ENST00000275954 IL26Q9NPH9 171 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 CCDC177Q9NQR7 707 aaPredicted RBP13.97□□□□□ -0.17
TMEM47-201ENST00000275954 IFT80Q9P2H3 777 aaPredicted RBP13.97□□□□□ -0.17
TMEM47-201ENST00000275954 FESP07332 822 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 DEFA1P59665 94 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 DEFA3P59666 94 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 LPAL2Q16609 132 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 DGUOKQ16854 277 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 GTDC1Q4AE62 458 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 TMEM31Q5JXX7 168 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 KRT73Q86Y46 540 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 NODALQ96S42 347 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 MAGEE1Q9HCI5 957 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 PDE10AQ9Y233 779 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 ANGPT4Q9Y264 503 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 RUVBL1Q9Y265 456 aaKnown RBP13.97□□□□□ -0.17
TMEM47-201ENST00000275954 KIAA1217Q5T5P2 1943 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 PLK4O00444 970 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 FABP3P05413 133 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 ZDHHC20Q5W0Z9 365 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 BLOC1S3Q6QNY0 202 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 Q7L0L9 218 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
TMEM47-201ENST00000275954 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 CHST14Q8NCH0 376 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 PSMA8Q8TAA3 256 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 LRCH3Q96II8 777 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 NUAK2Q9H093 628 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 IL17CQ9P0M4 197 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 DNAJB9Q9UBS3 223 aa13.97□□□□□ -0.17
TMEM47-201ENST00000275954 TNFRSF11BO00300 401 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 OR1F1O43749 312 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 PCDH7O60245 1069 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 FOXD2O60548 495 aaPredicted RBP13.96□□□□□ -0.17
TMEM47-201ENST00000275954 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
TMEM47-201ENST00000275954 TNNI3P19429 210 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 CXCR2P25025 360 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 NTSP30990 170 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 ADRA1AP35348 466 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 MAPK12P53778 367 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 C1DQ13901 141 aaKnown RBP13.96□□□□□ -0.17
TMEM47-201ENST00000275954 RFX4Q33E94 735 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 CLEC14AQ86T13 490 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 SLC22A15Q8IZD6 547 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 BCL7CQ8WUZ0 217 aaPredicted RBP13.96□□□□□ -0.17
TMEM47-201ENST00000275954 MUC13Q9H3R2 512 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 ZNF576Q9H609 170 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 NOL6Q9H6R4 1146 aaKnown RBP13.96□□□□□ -0.17
TMEM47-201ENST00000275954 AIG1Q9NVV5 245 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 PCTPQ9UKL6 214 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 KRT8P05787 483 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 ARNTP27540 789 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 CYP27C1Q4G0S4 372 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 DGKKQ5KSL6 1271 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 C9orf64Q5T6V5 341 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 SH2D5Q6ZV89 423 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 PAGE2Q7Z2X7 111 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 CLIP3Q96DZ5 547 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 QRFPRQ96P65 431 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 ARNT2Q9HBZ2 717 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 SLAMF8Q9P0V8 285 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 TBX21Q9UL17 535 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 PLAGL1Q9UM63 463 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 TMEM98Q9Y2Y6 226 aa13.96□□□□□ -0.17
TMEM47-201ENST00000275954 LINC01553A4QN01 128 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 KRT75O95678 551 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 SOX6P35712 828 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 CTSOP43234 321 aaPredicted RBP13.96□□□□□ -0.18
TMEM47-201ENST00000275954 ASMTP46597 345 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 GK3PQ14409 553 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 DSC3Q14574 896 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 NCF4Q15080 339 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 TCEAL5Q5H9L2 206 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 LEMD2Q8NC56 503 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 CD200R1Q8TD46 325 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 PEX13Q92968 403 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 TRMT61BQ9BVS5 477 aaKnown RBP13.96□□□□□ -0.18
TMEM47-201ENST00000275954 SPACA6W5XKT8 324 aa13.96□□□□□ -0.18
TMEM47-201ENST00000275954 ARFGEF1Q9Y6D6 1849 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 LOC285095A0A1B0GVY8 99 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 TSPAN6O43657 245 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 ERN1O75460 977 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 POP7O75817 140 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 KRT20P35900 424 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SGSHP51688 502 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CDC42P60953 191 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 PIGFQ07326 219 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 GANABQ14697 944 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CES4AQ5XG92 561 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms