RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 DHRS7Q9Y394 339 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGN3-201ENST00000275036 NUP210LQ5VU65 1888 aa13.86□□□□□ -0.19
HMGN3-201ENST00000275036 DOCK10Q96BY6 2186 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 MYO1CO00159 1063 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 ZSCAN9O15535 394 aaPredicted RBP13.85□□□□□ -0.19
HMGN3-201ENST00000275036 CTSVO60911 334 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 HBQ1P09105 142 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 CASRP41180 1078 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 ELK3P41970 407 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 CSRP3P50461 194 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 ITGA8P53708 1063 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 MORF4L2Q15014 288 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 TCTN3Q6NUS6 607 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 CYHR1Q6ZMK1 362 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
HMGN3-201ENST00000275036 NEK10Q6ZWH5 1172 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
HMGN3-201ENST00000275036 OR2L3Q8NG85 312 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 OR2A1Q8NGT9 310 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 OR9A1PQ8NGU1 263 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 PKP4Q99569 1192 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 NDNQ99608 321 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 MIPEPQ99797 713 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 SLC7A5P2Q9GIP4 190 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 KLHL42Q9P2K6 505 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 AP1M2Q9Y6Q5 423 aa13.85□□□□□ -0.19
HMGN3-201ENST00000275036 FLNCQ14315 2725 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CCDC188H7C350 402 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CNOT3O75175 753 aaKnown RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 KLF7O75840 302 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 SEC31AO94979 1220 aaKnown RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 TTC4O95801 387 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 ITGAXP20702 1163 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 MCM3P25205 808 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 MRPS25P82663 173 aaKnown RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 KCNC4Q03721 635 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 NCF4Q15080 339 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 IGFBP7Q16270 282 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 TTLL9Q3SXZ7 439 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 SPANXN3Q5MJ09 141 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 RBM20Q5T481 1227 aaKnown RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 TLDC1Q6P9B6 456 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 TRMT10BQ6PF06 316 aaKnown RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 SUSD1Q6UWL2 747 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CNTN4Q8IWV2 1026 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CPNE9Q8IYJ1 553 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 MAGEC3Q8TD91 643 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 ASB11Q8WXH4 323 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 THAP4Q8WY91 577 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CERS2Q96G23 380 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 RUNDC3BQ96NL0 473 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 KRT12Q99456 494 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 DPH2Q9BQC3 489 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-201ENST00000275036 ACAT2Q9BWD1 397 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 TRIM31Q9BZY9 425 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 ANAPC2Q9UJX6 822 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 SNX7Q9UNH6 387 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 CHMP2BQ9UQN3 213 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 KLK4Q9Y5K2 254 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 COMMD10Q9Y6G5 202 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 TEX264Q9Y6I9 313 aa13.84□□□□□ -0.19
HMGN3-201ENST00000275036 COL12A1Q99715 3063 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 MKRN2OSH3BPM6 223 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 GFYI3L273 518 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 FKBP9O95302 570 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 SLC16A8O95907 504 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 AHSGP02765 367 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 CATP04040 527 aaKnown RBP13.83□□□□□ -0.2
HMGN3-201ENST00000275036 MPC1LP0DKB6 136 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.2
HMGN3-201ENST00000275036 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
HMGN3-201ENST00000275036 PGGT1BP53609 377 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 CDKN2DP55273 166 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 SLC9A5Q14940 896 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 TEDDM1Q5T9Z0 273 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 FRMPD2BQ6IN97 320 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 ASB18Q6ZVZ8 466 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 PDIK1LQ8N165 341 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 DTWD1Q8N5C7 304 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
HMGN3-201ENST00000275036 PPFIBP2Q8ND30 876 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 SEC14L1Q92503 715 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 DLG3Q92796 817 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 ZUFSPQ96AP4 578 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 CFAP36Q96G28 342 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 ZNF285Q96NJ3 590 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 NAT9Q9BTE0 207 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 ING2Q9H160 280 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 SYNPO2LQ9H987 977 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms