RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 MICU2Q8IYU8 434 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 OR4K1Q8NGD4 311 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 EBLN1P0CF75 366 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 TYRP14679 529 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 OCA2Q04671 838 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 CD47Q08722 323 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 MESP2Q0VG99 397 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 ATP1A4Q13733 1029 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 CTU2Q2VPK5 515 aaKnown RBP16.17■□□□□ 0.18
VPS54-201ENST00000272322 SYTL3Q4VX76 610 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 COQ5Q5HYK3 327 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 KLHL35Q6PF15 583 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 ERI1Q8IV48 349 aaKnown RBP16.17■□□□□ 0.18
VPS54-201ENST00000272322 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
VPS54-201ENST00000272322 DPP10Q8N608 796 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 LHPPQ9H008 270 aa16.17■□□□□ 0.18
VPS54-201ENST00000272322 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
VPS54-201ENST00000272322 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
VPS54-201ENST00000272322 H0YJX3 145 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 Q6ZNB5 142 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 CEP68Q76N32 757 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 SLAIN1Q8ND83 568 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 ZNF555Q8NEP9 628 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 OVCA2Q8WZ82 227 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 FAM118AQ9NWS6 357 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 NOL3O60936 208 aaKnown RBP16.16■□□□□ 0.18
VPS54-201ENST00000272322 UMPSP11172 480 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 LAMP1P11279 417 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 ATP1B2P14415 290 aaPredicted RBP16.16■□□□□ 0.18
VPS54-201ENST00000272322 ENGP17813 658 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 ACOX1Q15067 660 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 CCNYL2Q5T2Q4 361 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 THAP5Q7Z6K1 395 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 ZDHHC21Q8IVQ6 265 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 SYTL1Q8IYJ3 562 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 MCOLN3Q8TDD5 553 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 PDLIM5Q96HC4 596 aaKnown RBP16.16■□□□□ 0.18
VPS54-201ENST00000272322 FAM83DQ9H4H8 585 aa16.16■□□□□ 0.18
VPS54-201ENST00000272322 KAT8Q9H7Z6 458 aaKnown RBP16.16■□□□□ 0.18
VPS54-201ENST00000272322 CFAP20Q9Y6A4 193 aaKnown RBP16.16■□□□□ 0.18
VPS54-201ENST00000272322 AGRPO00253 132 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 FPGTO14772 594 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 ACPPP15309 386 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 MSH3P20585 1137 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 SPINT3P49223 89 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 PLXNA3P51805 1871 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 GRIK2Q13002 908 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 KLHL23Q8NBE8 558 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 OR5AK3PQ8NH89 298 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 TSPEARQ8WU66 669 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 SNX19Q92543 992 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 SAMD11Q96NU1 681 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 IRAK4Q9NWZ3 460 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 NUMA1Q14980 2115 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 A0A0J9YVX5 310 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 YY2O15391 372 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 INMTO95050 263 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 ETHE1O95571 254 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 IL6P05231 212 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 AOAHP28039 575 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 KIR3DL1P43629 444 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 MAP2K4P45985 399 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 MTA1Q13330 715 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 CARD16Q5EG05 197 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 FRG2Q64ET8 278 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 TMEM215Q68D42 235 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 NOXRED1Q6NXP6 359 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 MACC1Q6ZN28 852 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 TCEAL8Q8IYN2 117 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 FRG2BQ96QU4 278 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 CLMPQ9H6B4 373 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 RUBCNLQ9H714 662 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 ASAH2Q9NR71 780 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 AASDHPPTQ9NRN7 309 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 SLC25A13Q9UJS0 675 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 BAG5Q9UL15 447 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 THSD7BQ9C0I4 1608 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 MAGEB17A8MXT2 336 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 WASH3PC4AMC7 463 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 CLIC1O00299 241 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 BMP10O95393 424 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 SLC16A8O95907 504 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 CD22P20273 847 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 DCTP40126 519 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 OR1E2P47887 323 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 ADARB1P78563 741 aaKnown RBP16.15■□□□□ 0.18
VPS54-201ENST00000272322 RUNDC3AQ59EK9 446 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 PACRGLQ8N7B6 248 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 FIBINQ8TAL6 211 aa16.15■□□□□ 0.18
VPS54-201ENST00000272322 DNMT3BQ9UBC3 853 aaKnown RBP16.15■□□□□ 0.18
VPS54-201ENST00000272322 EVPLLA8MZ36 301 aa16.14■□□□□ 0.17
VPS54-201ENST00000272322 FKTNO75072 461 aa16.14■□□□□ 0.17
VPS54-201ENST00000272322 ERVFC1P60507 584 aa16.14■□□□□ 0.17
VPS54-201ENST00000272322 RAPSNQ13702 412 aa16.14■□□□□ 0.17
VPS54-201ENST00000272322 TMPRSS11BQ86T26 416 aa16.14■□□□□ 0.17
VPS54-201ENST00000272322 EID3Q8N140 333 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms