RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TTC34A8MYJ7 566 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 SMAD6O43541 496 aaKnown RBP16.45■□□□□ 0.22
RTN1-201ENST00000267484 ITGAMP11215 1152 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 CD36P16671 472 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 DGKAP23743 735 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 CREMQ03060 361 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 ACOX1Q15067 660 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 CHRNA6Q15825 494 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 TPD52L3Q96J77 140 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 KCNH6Q9H252 994 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 MAGIXQ9H6Y5 334 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 SCN3BQ9NY72 215 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 MBD1Q9UIS9 605 aaPredicted RBP16.45■□□□□ 0.22
RTN1-201ENST00000267484 CRLS1Q9UJA2 301 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 WDR37Q9Y2I8 494 aa16.45■□□□□ 0.22
RTN1-201ENST00000267484 ERN1O75460 977 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 VIPP01282 170 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 SDC1P18827 310 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 ST13P50502 369 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 FCGRTP55899 365 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 GPR17Q13304 367 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 SOWAHCQ53LP3 525 aaPredicted RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 TMEM53Q6P2H8 277 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 ARL15Q9NXU5 204 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 KIF17Q9P2E2 1029 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 A0A096LPI6 279 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 A0A1B0GVM2 712 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 C2orf78A6NCI8 922 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 SYN3O14994 580 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 RGS10O43665 173 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 C21orf33P30042 268 aaPredicted RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 CASP9P55211 416 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 PDE12Q6L8Q7 609 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 PLEKHG7Q6ZR37 379 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 SNX20Q7Z614 316 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 TSPAN33Q86UF1 283 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 PLD3Q8IV08 490 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 PSD4Q8NDX1 1056 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 USP7Q93009 1102 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 SLIRPQ9GZT3 109 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 ZFYVE1Q9HBF4 777 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 SCHIP1Q9P0W5 487 aaPredicted RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 M0QX08 132 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 BNIP3LO60238 219 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 PCDHGA12O60330 932 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 ADAMTS4O75173 837 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 CLDN9O95484 217 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 CPSF4O95639 269 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 IGHA2P01877 340 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 EBLN1P0CF75 366 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 GSTT2P0CG29 244 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 GSTT2BP0CG30 244 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 PAX3P23760 479 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 TRIM71Q2Q1W2 868 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 COLEC12Q5KU26 742 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 KDM4DQ6B0I6 523 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 ZNF621Q6ZSS3 439 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 HORMAD1Q86X24 394 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 RBFAQ8N0V3 343 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 ZNF566Q969W8 418 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 MYO19Q96H55 970 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 RNF167Q9H6Y7 350 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 ITM2CQ9NQX7 267 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 THG1LQ9NWX6 298 aaKnown RBP16.44■□□□□ 0.22
RTN1-201ENST00000267484 FAM8A1Q9UBU6 413 aa16.44■□□□□ 0.22
RTN1-201ENST00000267484 MYO1DO94832 1006 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 COL6A1P12109 1028 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
RTN1-201ENST00000267484 TPTEP56180 551 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 MAD2L1BPQ15013 274 aaPredicted RBP16.43■□□□□ 0.22
RTN1-201ENST00000267484 RFX4Q33E94 735 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 LRIF1Q5T3J3 769 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 GPRC6AQ5T6X5 926 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 SYT6Q5T7P8 510 aaPredicted RBP16.43■□□□□ 0.22
RTN1-201ENST00000267484 GPR153Q6NV75 609 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 RFLNAQ6ZTI6 216 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 CLECL1Q8IZS7 167 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 SETD9Q8NE22 299 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 PIH1D2Q8WWB5 315 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 S100ZQ8WXG8 99 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 PROX1Q92786 737 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 DACH2Q96NX9 599 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 ELOVL6Q9H5J4 265 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 NECTIN3Q9NQS3 549 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 KRT84Q9NSB2 600 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 MARCH5Q9NX47 278 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 POU2F3Q9UKI9 436 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 PCDHGB1Q9Y5G3 927 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 PRRC2BQ5JSZ5 2229 aaKnown RBP16.43■□□□□ 0.22
RTN1-201ENST00000267484 FZD6O60353 706 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 TBL1XO60907 577 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 NUDT7P0C024 238 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 BPIP17213 487 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 ENGP17813 658 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 ITPKAP23677 461 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 LIPAP38571 399 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 CLDN8P56748 225 aa16.43■□□□□ 0.22
RTN1-201ENST00000267484 CAPN13Q6MZZ7 669 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms