RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 FKBP9O95302 570 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 MATN4O95460 622 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ESR1P03372 595 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ITGAXP20702 1163 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 FMO4P31512 558 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 CCNFP41002 786 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 FOLR3P41439 243 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ARSFP54793 590 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ADARP55265 1226 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 EIF3BP55884 814 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 FOXL2P58012 376 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 CCZ1BP86790 482 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 CCZ1P86791 482 aaPredicted RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 TAGLNQ01995 201 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 GBX1Q14549 363 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 KCNJ11Q14654 390 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 TYSND1Q2T9J0 566 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 CCSMST1Q4G0I0 132 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ZC3H12BQ5HYM0 836 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 DCAF10Q5QP82 559 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ARMC3Q5W041 872 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 JMJD6Q6NYC1 403 aaPredicted RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 TTC27Q6P3X3 843 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 TAX1BP1Q86VP1 789 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 CAND1Q86VP6 1230 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 HPS6Q86YV9 775 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 TMEM151BQ8IW70 566 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 FAM26EQ8N5C1 309 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 RBMXL3Q8N7X1 1067 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 CPT1CQ8TCG5 803 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 DENND1AQ8TEH3 1009 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 SKA2Q8WVK7 121 aaPredicted RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 NACC2Q96BF6 587 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 FER1L6-AS2Q96M78 137 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ZNF285Q96NJ3 590 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 RAB11FIP5Q9BXF6 653 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 TSPAN10Q9H1Z9 355 aaPredicted RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 INTS7Q9NVH2 962 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 IRAK4Q9NWZ3 460 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 P4HTMQ9NXG6 502 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 GPR83Q9NYM4 423 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 ANKMY1Q9P2S6 941 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 NDOR1Q9UHB4 597 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 G3BP2Q9UN86 482 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 RUVBL2Q9Y230 463 aaKnown RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 KLK4Q9Y5K2 254 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 MRFAP1Q9Y605 127 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 PTPN13Q12923 2485 aa9.33□□□□□ -0.92
VPS41-201ENST00000265745 RP1L1Q8IWN7 2480 aaPredicted RBP9.33□□□□□ -0.92
VPS41-201ENST00000265745 SPTBP11277 2137 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 A0A1B0GX78 115 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 A0A1W2PPV9 198 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 MAGEB16A2A368 324 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 KRT87PA6NCN2 255 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 PEX12O00623 359 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 PFDN6O15212 129 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 SRPX2O60687 465 aaPredicted RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 CTSVO60911 334 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 NIPSNAP2O75323 286 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 IGHEP01854 428 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 UMODP07911 640 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 CHRM3P20309 590 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 OGNP20774 298 aaKnown RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 MCM3P25205 808 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 ATP5DP30049 168 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 BDKRB1P46663 353 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 SOX8P57073 446 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 SARNPP82979 210 aaKnown RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 GPS1Q13098 491 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 RAPSNQ13702 412 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 GRM7Q14831 915 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 CYP2A13Q16696 494 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 TCTE1Q5JU00 501 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 RNF187Q5TA31 235 aaPredicted RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 VWA5B1Q5TIE3 1220 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 YOD1Q5VVQ6 348 aaPredicted RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 ANKRD22Q5VYY1 191 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 KIAA0930Q6ICG6 404 aaPredicted RBP9.32□□□□□ -0.92
VPS41-201ENST00000265745 NEPROQ6NW34 567 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 TTLL10Q6ZVT0 673 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 CENPUQ71F23 418 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 OVCH1Q7RTY7 1134 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 CILP2Q8IUL8 1156 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 OTUD6BQ8N6M0 293 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 Q8NA96 180 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 GALNT11Q8NCW6 608 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 OR2L3Q8NG85 312 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 OR2A1Q8NGT9 310 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 MAGEC3Q8TD91 643 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 DLG3Q92796 817 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 FOPNLQ96NB1 174 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 SELENOSQ9BQE4 189 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 CUTCQ9NTM9 273 aa9.32□□□□□ -0.92
VPS41-201ENST00000265745 C5AR2Q9P296 337 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms