RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 HSH2DQ96JZ2 352 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 DIABLOQ9NR28 239 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 RFPL2O75678 378 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 OGNP20774 298 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 TGFBR1P36897 503 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 FAM180BQ6P0A1 224 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 PEX16Q9Y5Y5 336 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 OAS3Q9Y6K5 1087 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 PSKH1P11801 424 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 PIGAP37287 484 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 FOXM1Q08050 763 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 CAMK2GQ13555 558 aaPredicted RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 IL18Q14116 193 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 PAQR9Q6ZVX9 377 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 ZZZ3Q8IYH5 903 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 FUBP1Q96AE4 644 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 OTUB1Q96FW1 271 aaPredicted RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 NUDT4Q9NZJ9 180 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 TOGARAM1Q9Y4F4 1720 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 FABP12A6NFH5 140 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 HAT1O14929 419 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 CORO1AP31146 461 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 YBEYP58557 167 aaPredicted RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 CDK5R2Q13319 367 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 CCL14Q16627 93 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 LRRTM3Q86VH5 581 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 ZBTB2Q8N680 514 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 LSM14AQ8ND56 463 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 OR10G2Q8NGC3 310 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 IRGQQ8WZA9 623 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 PMEPA1Q969W9 287 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 TUBA1CQ9BQE3 449 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 TP63Q9H3D4 680 aaPredicted RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 CCDC59Q9P031 241 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 GTF2IRD1Q9UHL9 959 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 TMEM98Q9Y2Y6 226 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 M0QX08 132 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 PTGESO14684 152 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 CRYZL1O95825 349 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 ESR1P03372 595 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 EMX2Q04743 252 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 ST3GAL4Q11206 333 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 SF1Q15637 639 aaKnown RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 HKDC1Q2TB90 917 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 HECTD3Q5T447 861 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 ERICH5Q6P6B1 374 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 TMPRSS11BQ86T26 416 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 CHDHQ8NE62 594 aaPredicted RBP16.69■□□□□ 0.26
SRF-201ENST00000265354 SGK2Q9HBY8 427 aa16.69■□□□□ 0.26
SRF-201ENST00000265354 EVPLQ92817 2033 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 GLYATL1P3A0A0U1RQE8 302 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 SERPINB7O75635 380 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 GADD45AP24522 165 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 DNAJA1P31689 397 aaKnown RBP16.68■□□□□ 0.26
SRF-201ENST00000265354 OR1D2P34982 312 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 SEMA3AQ14563 771 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 SF3B4Q15427 424 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■□□□□ 8.1
SRF-201ENST00000265354 TYSND1Q2T9J0 566 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 DESI1Q6ICB0 168 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 TRAPPC5Q8IUR0 188 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 PIANPQ8IYJ0 282 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 OR10T2Q8NGX3 314 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 MAL2Q969L2 176 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 TSGA13Q96PP4 275 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 DERL2Q9GZP9 239 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 TVP23BQ9NYZ1 205 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 CD300AQ9UGN4 299 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 ADAMTS7Q9UKP4 1686 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 NINQ8N4C6 2090 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 SLC35F4A4IF30 521 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 ACOX3O15254 700 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 PTNP21246 168 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 EDNRBP24530 442 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 PIK3R6Q5UE93 754 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 KCTD11Q693B1 232 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 ZNF544Q6NX49 715 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.68■□□□□ 0.26
SRF-201ENST00000265354 VN1R5Q7Z5H4 357 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 CYP4Z1Q86W10 505 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 LGI4Q8N135 537 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 OR4K1Q8NGD4 311 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 PROKR1Q8TCW9 393 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 PHOX2BQ99453 314 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 TBC1D17Q9HA65 648 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 UTS2RQ9UKP6 389 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 A0A1B0GTL3 188 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 MSL3P1P0C860 447 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 DCKP27707 260 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 PTGER3P43115 390 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 CCL23P55773 120 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 CSNK2BP67870 215 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 TBRG1Q3YBR2 411 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 USP30Q70CQ3 517 aa16.68■□□□□ 0.26
SRF-201ENST00000265354 CADM3Q8N126 398 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms