RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 OR6C70A6NIJ9 312 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF670-ZNF695F2Z2N8 137 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 CYP1A2P05177 515 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 FASLGP48023 281 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TOB1P50616 345 aaPredicted RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 NRLP54845 237 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 DEFB115Q30KQ5 88 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 NUS1Q96E22 293 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SLC22A4Q9H015 551 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 RIDAP52758 137 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 RBM20Q5T481 1227 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF598Q86UK7 904 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TEX19Q8NA77 164 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 OR6N1Q8NGY5 312 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 RHOJQ9H4E5 214 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TARBP1Q13395 1621 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 AGPSO00116 658 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 IFI44LQ53G44 452 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 AMZ2Q86W34 360 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 FUKQ8N0W3 1084 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SVOPLQ8N434 492 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 OR52E4Q8NGH9 312 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 EPYCQ99645 322 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 DISC1C4P0D8 188 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PHC1P78364 1004 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 LRRC32Q14392 662 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TIGD6Q17RP2 521 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SLC25A52Q3SY17 297 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SERPINA9Q86WD7 417 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TMEM126BQ8IUX1 230 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ALPK1Q96QP1 1244 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 POLR2J2Q9GZM3 115 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 OR6C75A6NL08 312 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 MMP14P50281 582 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 POLR2HP52434 150 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TMBIM6P55061 237 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 CAP1Q01518 475 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PLP2Q04941 152 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SCARB2Q14108 478 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 CHRFAM7AQ494W8 412 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TMPPEQ6ZT21 453 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 CREG2Q8IUH2 290 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 C12orf43Q96C57 262 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 KCTD7Q96MP8 289 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 OR2AG1Q9H205 316 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 EHD4Q9H223 541 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 CDH22Q9UJ99 828 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 SH2B3Q9UQQ2 575 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 DNMT3AQ9Y6K1 912 aaPredicted RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TPPPO94811 219 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TGDSO95455 350 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PKMP14618 531 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ARL9Q6T311 187 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 TMEM151BQ8IW70 566 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 BPIFB1Q8TDL5 484 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 BARD1Q99728 777 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF701Q9NV72 531 aaPredicted RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ZNF175Q9Y473 711 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 FAM155BO75949 473 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 GJB1P08034 283 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PET100P0DJ07 73 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 ANXA3P12429 323 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 HNRNPKP61978 463 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 GNMTQ14749 295 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PDGFRLQ15198 375 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 FAM189A2Q15884 450 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 PHC3Q8NDX5 983 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 RPL10LQ96L21 214 aaKnown RBP11.14□□□□□ -0.63
PTPN4-201ENST00000263708 RGCCQ9H4X1 137 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 GRHPRQ9UBQ7 328 aa11.14□□□□□ -0.63
PTPN4-201ENST00000263708 LGR5O75473 907 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 FNTBP49356 437 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 GALK2Q01415 458 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 FAM174BQ3ZCQ3 159 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 TMEM35AQ53FP2 167 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 PAMR1Q6UXH9 720 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 AENQ8WTP8 325 aaKnown RBP11.13□□□□□ -0.63
PTPN4-201ENST00000263708 PCDHB18PQ96TA0 734 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 NCDNQ9UBB6 729 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 SPATA31A1Q5TZJ5 1347 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 A0A1B0GVI7 797 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 CXCR6O00574 342 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 CRISP3P54108 245 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 NIPAL4Q0D2K0 466 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 CARD17Q5XLA6 110 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 LPGAT1Q92604 370 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
PTPN4-201ENST00000263708 A0A1W2PQ45 241 aaPredicted RBP11.13□□□□□ -0.63
PTPN4-201ENST00000263708 A0A1W2PQY0 241 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms