RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SFRP1Q8N474 314 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 GPBAR1Q8TDU6 330 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 EDAQ92838 391 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 WDR34Q96EX3 536 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 NRTNQ99748 197 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 KLF15Q9UIH9 416 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 SH2B3Q9UQQ2 575 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 DYRK1BQ9Y463 629 aa22.15■■□□□ 1.14
SMARCB1-201ENST00000263121 MEI4A8MW99 385 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 SLC28A1O00337 649 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 WNT1P04628 370 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 HNF4AP41235 474 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 RACK1P63244 317 aaKnown RBP22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 ILF3Q12906 894 aaKnown RBP eCLIP22.14■■□□□ 1.141e-9■■□□□ 11.4
SMARCB1-201ENST00000263121 TCEA2Q15560 299 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 C6orf136Q5SQH8 315 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 PRAMEF14Q5SWL7 426 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 PRAMEF13Q5VWM6 474 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 IQCHQ86VS3 1027 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 PARGQ86W56 976 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 KLHL29Q96CT2 875 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 CMTM5Q96DZ9 223 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 HSPA12BQ96MM6 686 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 TCEAL2Q9H3H9 227 aaPredicted RBP22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 CAAP1Q9H8G2 361 aa22.14■■□□□ 1.14
SMARCB1-201ENST00000263121 SERTM1A2A2V5 107 aa22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 LSM1O15116 133 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 CD38P28907 300 aa22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 IRX1P78414 480 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 TSTA3Q13630 321 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 RAB42Q8N4Z0 105 aa22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 HMGCLL1Q8TB92 370 aa22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 RAB11FIP5Q9BXF6 653 aa22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 ELOVL6Q9H5J4 265 aa22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 SPATA6Q9NWH7 488 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-201ENST00000263121 CCDC163A0A0D9SF12 145 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 H0YIV9 168 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 RGS14O43566 566 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 PDYNP01213 254 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 COX4I1P13073 169 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 CD1EP15812 388 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 MAOBP27338 520 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 PTPN4P29074 926 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 PKLRP30613 574 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 CPA2P48052 419 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 RAB28P51157 221 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 ERVK-8P63133 956 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 KRT33BQ14525 404 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 HERC3Q15034 1050 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 ATP6AP1LQ52LC2 224 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 SGO1Q5FBB7 561 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 FRG2Q64ET8 278 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 TMPRSS11BQ86T26 416 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 POU5F2Q8N7G0 328 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 LINC01555Q8NAE3 123 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 OR52E1Q8NGJ3 308 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 C1orf216Q8TAB5 229 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 SLC5A11Q8WWX8 675 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 SELENOMQ8WWX9 145 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 SMPDL3AQ92484 453 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 FRG2BQ96QU4 278 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 HAUS8Q9BT25 410 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 EHD1Q9H4M9 534 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 KIR3DX1Q9H7L2 352 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 ZNF624Q9P2J8 865 aaPredicted RBP22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 COLEC10Q9Y6Z7 277 aa22.13■■□□□ 1.13
SMARCB1-201ENST00000263121 CEP192Q8TEP8 1941 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 PRAMEF33A0A0G2JMD5 474 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 A0A1W2PPV9 198 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 MAP3K13O43283 966 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 F3P13726 295 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 VARSP26640 1264 aaKnown RBP22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 MRPL19P49406 292 aaKnown RBP22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 ZNF33BQ06732 778 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 NR6A1Q15406 480 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 GSTA3Q16772 222 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 ZNF542PQ5EBM4 170 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 ATG9BQ674R7 924 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 RINLQ6ZS11 566 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 PHACTR4Q8IZ21 702 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 C2orf73Q8N5S3 287 aaPredicted RBP22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 WDR20Q8TBZ3 569 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 PPP3R2Q96LZ3 170 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 GSDMCQ9BYG8 508 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 TM9SF3Q9HD45 589 aa22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 PRMT8Q9NR22 394 aaPredicted RBP22.12■■□□□ 1.13
SMARCB1-201ENST00000263121 FANCMQ8IYD8 2048 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 IDO1P14902 403 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 NDUFS1P28331 727 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 BLKP51451 505 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 SMU1Q2TAY7 513 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 CATSPEREQ5SY80 951 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 THEMIS2Q5TEJ8 643 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 LPCAT2Q7L5N7 544 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 KIF2BQ8N4N8 673 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 OR2L8Q8NGY9 312 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 RP9Q8TA86 221 aaKnown RBP22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 DNASE2BQ8WZ79 361 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 MTFMTQ96DP5 389 aaKnown RBP22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 ACPTQ9BZG2 426 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms