RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 EEF1AKMT1Q8WVE0 214 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 ELMO2Q96JJ3 720 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 OLFM1Q99784 485 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 SLC39A10Q9ULF5 831 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 DMXL2Q8TDJ6 3036 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 IGF2RP11717 2491 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 FAM95CA0A1B0GW59 222 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 B4E171 279 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 UNC5CO95185 931 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 CATP04040 527 aaKnown RBP16.21■□□□□ 0.19
SDCBP-201ENST00000260130 CHRM5P08912 532 aaPredicted RBP16.21■□□□□ 0.19
SDCBP-201ENST00000260130 KRT15P19012 456 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 GCAP28676 217 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 PKLRP30613 574 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 TSPAN7P41732 249 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 MSH2P43246 934 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 TLDC1Q6P9B6 456 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 PIWIL4Q7Z3Z4 852 aaKnown RBP16.21■□□□□ 0.19
SDCBP-201ENST00000260130 PROSER1Q86XN7 944 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 PPM1NQ8N819 430 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 BMPERQ8N8U9 685 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 AGAP11Q8TF27 550 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 ASB11Q8WXH4 323 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 FGF11Q92914 225 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 USP7Q93009 1102 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 VPS39Q96JC1 886 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 C1GALT1Q9NS00 363 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 ACTR10Q9NZ32 417 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 USH1CQ9Y6N9 552 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 KIF26BQ2KJY2 2108 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 ARHGEF33A8MVX0 844 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 POC1B-GALNT4F8VUJ3 575 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 GFYI3L273 518 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 NVLO15381 856 aaKnown RBP16.2■□□□□ 0.18
SDCBP-201ENST00000260130 NELFEP18615 380 aaKnown RBP16.2■□□□□ 0.18
SDCBP-201ENST00000260130 SAT1P21673 171 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 PHBP35232 272 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 GP5P40197 560 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 MC2RQ01718 297 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 TMEM164Q5U3C3 297 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 FAM47EQ6ZV65 393 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 CLEC14AQ86T13 490 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 KMT5CQ86Y97 462 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 LINC01555Q8NAE3 123 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 DENND1AQ8TEH3 1009 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 PPM1MQ96MI6 270 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 IL17FQ96PD4 163 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 TAAR9Q96RI9 348 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 RAB11FIP5Q9BXF6 653 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 TWSG1Q9GZX9 223 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 SLC39A1Q9NY26 324 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 SPHK1Q9NYA1 384 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 PCDHGA7Q9Y5G6 932 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 CELSR3Q9NYQ7 3312 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 TAF4O00268 1085 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 ZBTB14O43829 449 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 SPAG7O75391 227 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 ANP32DO95626 131 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 CDH3P22223 829 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 ALDH3A1P30838 453 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 SLC5A2P31639 672 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 PGGT1BP53609 377 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 IL2P60568 153 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 PDK4Q16654 411 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.2■□□□□ 0.18
SDCBP-201ENST00000260130 KIF2BQ8N4N8 673 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 RAB42Q8N4Z0 105 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 OR2L8Q8NGY9 312 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 SLC41A2Q96JW4 573 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 RBBP8Q99708 897 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 B3GNT4Q9C0J1 378 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 FBXO8Q9NRD0 319 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 STK38LQ9Y2H1 464 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 C15orf41Q9Y2V0 281 aa16.2■□□□□ 0.18
SDCBP-201ENST00000260130 KRT87PA6NCN2 255 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 TLX3O43711 291 aaPredicted RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 DCTN3O75935 186 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 WFS1O76024 890 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 ZBTB11O95625 1053 aaPredicted RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 ARL4DP49703 201 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 TAS2R39P59534 338 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 NAB1Q13506 487 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 KIR2DS3Q14952 304 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 GRTP1Q5TC63 336 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SPESP1Q6UW49 350 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 RASGRP3Q8IV61 690 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 MYO1HQ8N1T3 1032 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 C2orf73Q8N5S3 287 aaPredicted RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 FBXO15Q8NCQ5 510 aaPredicted RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 OR9A1PQ8NGU1 263 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 LRRC8CQ8TDW0 803 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 LINGO1Q96FE5 620 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 OR2A14Q96R47 310 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 SIDT1Q9NXL6 827 aaKnown RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 PSMC3IPQ9P2W1 217 aaPredicted RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 LNPEPQ9UIQ6 1025 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 MTO1Q9Y2Z2 717 aaKnown RBP16.19■□□□□ 0.18
SDCBP-201ENST00000260130 ISM1B1AKI9 464 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 C9orf172C9J069 976 aa16.19■□□□□ 0.18
SDCBP-201ENST00000260130 UGT2B7P16662 529 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms