RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 WDR34Q96EX3 536 aa17.16■□□□□ 0.34
CCDC115-201ENST00000259229 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
CCDC115-201ENST00000259229 ERVMER34-1Q9H9K5 563 aa17.16■□□□□ 0.34
CCDC115-201ENST00000259229 SLC40A1Q9NP59 571 aa17.16■□□□□ 0.34
CCDC115-201ENST00000259229 ZSCAN32Q9NX65 697 aa17.16■□□□□ 0.34
CCDC115-201ENST00000259229 APOBEC2Q9Y235 224 aaKnown RBP17.16■□□□□ 0.34
CCDC115-201ENST00000259229 COLEC10Q9Y6Z7 277 aa17.16■□□□□ 0.34
CCDC115-201ENST00000259229 KIR2DS5A0A0G2JLQ3 304 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 A0A0G2JNG1 304 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 ERICH4A6NGS2 130 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 CCT8L1PA6NM43 557 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 KIR2DS3K7RE56 304 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 EBAG9O00559 213 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 PRICKLE3O43900 615 aaPredicted RBP17.15■□□□□ 0.34
CCDC115-201ENST00000259229 PIAS2O75928 621 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 DCTN3O75935 186 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 CCND1P24385 295 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 PSMB5P28074 263 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 ARL1P40616 181 aaPredicted RBP17.15■□□□□ 0.34
CCDC115-201ENST00000259229 CASP2P42575 452 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 DOC2AQ14183 400 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 KIR2DS5Q14953 304 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 ELOCQ15369 112 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 ANGPT1Q15389 498 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 LARP4Q71RC2 724 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC115-201ENST00000259229 OR2T11Q8NH01 316 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 ACTRT2Q8TDY3 377 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 LMX1AQ8TE12 382 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 SMPDL3AQ92484 453 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 CCT6BQ92526 530 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 USP7Q93009 1102 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 CXorf40BQ96DE9 158 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 RILPQ96NA2 401 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 MIPEPQ99797 713 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 CCDC28BQ9BUN5 200 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 RAB11FIP5Q9BXF6 653 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 FARSBQ9NSD9 589 aaKnown RBP17.15■□□□□ 0.34
CCDC115-201ENST00000259229 POT1Q9NUX5 634 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 SNX11Q9Y5W9 270 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 PCDH15Q96QU1 1955 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 PCM1Q15154 2024 aa17.15■□□□□ 0.34
CCDC115-201ENST00000259229 ATP6AP2A0A1C7CYW4 349 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 PRR5-ARHGAP8B1AHC4 643 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 FCHO1O14526 889 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 FFAR3O14843 346 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 GPR42O15529 346 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CRCPO75575 148 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 ATP6AP2O75787 350 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 LINC00032P0C843 101 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 PRR35P0CG20 571 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 JUPP14923 745 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 GNAZP19086 355 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CNR2P34972 360 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 HNRNPKP61978 463 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCDC115-201ENST00000259229 IFT88Q13099 833 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 GPR18Q14330 331 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 KRT33BQ14525 404 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 ABRAXAS2Q15018 415 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SHBQ15464 509 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 TEAD4Q15561 434 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CATSPEREQ5SY80 951 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 LIPJQ5W064 366 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 GRHL2Q6ISB3 625 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SCIMPQ6UWF3 145 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 EFL1Q7Z2Z2 1120 aaKnown RBP17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CLNKQ7Z7G1 428 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 FAM46DQ8NEK8 389 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SETD7Q8WTS6 366 aaKnown RBP17.14■□□□□ 0.33
CCDC115-201ENST00000259229 ERP27Q96DN0 273 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 LRRC37BQ96QE4 947 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 HBEGFQ99075 208 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 ZNF385DQ9H6B1 395 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 UCKL1Q9NWZ5 548 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CPNE7Q9UBL6 633 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SPASTQ9UBP0 616 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 TAC3Q9UHF0 121 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CCL27Q9Y4X3 112 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 KCNE2Q9Y6J6 123 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CACNA1EQ15878 2313 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 OR5K4A6NMS3 321 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 ZNF839A8K0R7 811 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 E9PBE3 544 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 MANBAO00462 879 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 YY2O15391 372 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 AQP9O43315 295 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 KLHL41O60662 606 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SDC3O75056 442 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SERPINA6P08185 405 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 VARSP26640 1264 aaKnown RBP17.14■□□□□ 0.33
CCDC115-201ENST00000259229 HMOX2P30519 316 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 IRF8Q02556 426 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 TSTA3Q13630 321 aaPredicted RBP17.14■□□□□ 0.33
CCDC115-201ENST00000259229 TBCCQ15814 346 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 CPSF6Q16630 551 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SPRED3Q2MJR0 410 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 XKR6Q5GH73 641 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 TMEM198Q66K66 360 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 Q6ZSR9 355 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 TMPRSS11BQ86T26 416 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 DDIASQ8IXT1 998 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms