RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MLLT3P42568 568 aaPredicted RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 DNASE1L1P49184 302 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 C10orf62Q5T681 223 aaPredicted RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 TMEM214Q6NUQ4 689 aaKnown RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 GOLGA7Q7Z5G4 137 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 GALNT7Q86SF2 657 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 IFNLR1Q8IU57 520 aaPredicted RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 SIGLEC10Q96LC7 697 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 DSN1Q9H410 356 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 GALPQ9UBC7 116 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 SAP18O00422 153 aaKnown RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 EFNA1P20827 205 aaPredicted RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 DCUN1D3Q8IWE4 304 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 LINC00471Q8N535 108 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 ATP6V1C2Q8NEY4 427 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 TAC3Q9UHF0 121 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 WBP11Q9Y2W2 641 aaKnown RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 DGKBQ9Y6T7 804 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 CDC7O00311 574 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 COQ9O75208 318 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 IFNA6P05013 189 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 PIM1P11309 404 aaPredicted RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 SPATS1Q496A3 300 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 FAM156AQ8NDB6 213 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 ERVK-11Q9UQG0 969 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 PCDHB11Q9Y5F2 797 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 B4DGG1 531 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 DUOXA1Q1HG43 343 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 ITPRIPL2Q3MIP1 535 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 PLEKHS1Q5SXH7 462 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 RBM20Q5T481 1227 aaKnown RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 PACRGLQ8N7B6 248 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 DENND1AQ8TEH3 1009 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 COMMD4Q9H0A8 199 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 POLR2J3Q9H1A7 115 aaKnown RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 FZD4Q9ULV1 537 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 RPL36Q9Y3U8 105 aaKnown RBP18.51■□□□□ 0.55
PTPRE-201ENST00000254667 CLCA3PQ9Y6N3 262 aa18.51■□□□□ 0.55
PTPRE-201ENST00000254667 HMGN1P05114 100 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 AGXTP21549 392 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 PLEKHG6Q3KR16 790 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 LIN52Q52LA3 116 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 CXorf57Q6NSI4 855 aaKnown RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ADGRD2Q7Z7M1 963 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 UMODL1-AS1Q8N2C9 162 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 IFT27Q9BW83 186 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ING3Q9NXR8 418 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF823P16415 610 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF8P17098 575 aaPredicted RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 TARDBPQ13148 414 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 GPRC6AQ5T6X5 926 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 NAPRTQ6XQN6 538 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 CMTR2Q8IYT2 770 aaKnown RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 OR4F6Q8NGB9 312 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ARHGAP39Q9C0H5 1083 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 NEUROD4Q9HD90 331 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 C11orf16Q9NQ32 467 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF222Q9UK12 451 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ITGB1BP2Q9UKP3 347 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 NDUFS4O43181 175 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 COCHO43405 550 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 SLC8B1Q6J4K2 584 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF433Q8N7K0 673 aaPredicted RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 PJA1Q8NG27 643 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 GEMIN6Q8WXD5 167 aaKnown RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 ART5Q96L15 291 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 CREBZFQ9NS37 354 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 FAM120CQ9NX05 1096 aaKnown RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 C9J4A7 227 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 DNAJB13P59910 316 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 AGTRAPQ6RW13 159 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 PIM3Q86V86 326 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 SIX5Q8N196 739 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 NXPE1Q8N323 547 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 PXYLP1Q8TE99 480 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 SLC5A11Q8WWX8 675 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 TRIB2Q92519 343 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 GPN1Q9HCN4 374 aaPredicted RBP18.5■□□□□ 0.55
PTPRE-201ENST00000254667 SLC35C2Q9NQQ7 365 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 PPM1HQ9ULR3 514 aa18.5■□□□□ 0.55
PTPRE-201ENST00000254667 LATS1O95835 1130 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 GSTM3P21266 225 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 BDKRB1P46663 353 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 MSS51Q4VC12 460 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 TMEM198Q66K66 360 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 GKN2Q86XP6 184 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF280BQ86YH2 543 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 SMG8Q8ND04 991 aaKnown RBP18.49■□□□□ 0.55
PTPRE-201ENST00000254667 DGAT2Q96PD7 388 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 TRIM2Q9C040 744 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 COQ10BQ9H8M1 238 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 MAGEE1Q9HCI5 957 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 B4GALT6Q9UBX8 382 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 PRKAB1Q9Y478 270 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 RGPD8O14715 1765 aaPredicted RBP18.49■□□□□ 0.55
PTPRE-201ENST00000254667 AIREO43918 545 aa18.49■□□□□ 0.55
PTPRE-201ENST00000254667 PLOD3O60568 738 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms