RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 S100A3P33764 101 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 RPS9P46781 194 aaKnown RBP15.32■□□□□ 0.04
LRFN1-201ENST00000248668 HTRA4P83105 476 aaPredicted RBP15.32■□□□□ 0.04
LRFN1-201ENST00000248668 ZNF284Q2VY69 593 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 INTS11Q5TA45 600 aaKnown RBP15.32■□□□□ 0.04
LRFN1-201ENST00000248668 RASGEF1AQ8N9B8 481 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 PNPT1Q8TCS8 783 aaKnown RBP15.32■□□□□ 0.04
LRFN1-201ENST00000248668 SPPL3Q8TCT6 385 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 SNX6Q9UNH7 406 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 FADS3Q9Y5Q0 445 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 U3KQV3 271 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 E7EQ34 232 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 E2F6O75461 281 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 RASAL1O95294 804 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 GGT1P19440 569 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 CD22P20273 847 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 MAP4P27816 1152 aaKnown RBP15.32■□□□□ 0.04
LRFN1-201ENST00000248668 BMPR1AP36894 532 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 PSMD7P51665 324 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 CHRNB3Q05901 458 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 DHCR24Q15392 516 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 TMEM259Q4ZIN3 620 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 TMC5Q6UXY8 1006 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 CLEC4FQ8N1N0 589 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 ASZ1Q8WWH4 475 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 TMBIM1Q969X1 311 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 AP2M1Q96CW1 435 aa15.32■□□□□ 0.04
LRFN1-201ENST00000248668 TMA7Q9Y2S6 64 aaKnown RBP15.32■□□□□ 0.04
LRFN1-201ENST00000248668 H0YJX3 145 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 TFPTP0C1Z6 253 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 FCGR1AP12314 374 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 MTHFRP42898 656 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 DGKGP49619 791 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 PTPN5P54829 565 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 PFN3P60673 137 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 OR7A2PQ8NGA2 310 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 NXPE3Q969Y0 559 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 TMEM159Q96B96 161 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 CERS4Q9HA82 394 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 WASH3PC4AMC7 463 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 K7ESM1 405 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 PRKD3O94806 890 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 IL6P05231 212 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 CDH1P12830 882 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 SLC14A1Q13336 389 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 FRG2Q64ET8 278 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 TMEM220Q6QAJ8 160 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 PARS2Q7L3T8 475 aaKnown RBP15.31■□□□□ 0.04
LRFN1-201ENST00000248668 LRRC70Q7Z2Q7 622 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 ZNF548Q8NEK5 533 aaPredicted RBP15.31■□□□□ 0.04
LRFN1-201ENST00000248668 FRG2BQ96QU4 278 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 MUC13Q9H3R2 512 aa15.31■□□□□ 0.04
LRFN1-201ENST00000248668 ELOVL7A1L3X0 281 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 NOBOXO60393 691 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SLC6A12P48065 614 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 NR1H2P55055 460 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 DCTN2Q13561 401 aaKnown RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 FAM98BQ52LJ0 330 aaKnown RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 NECAB2Q7Z6G3 386 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 DHRSXQ8N5I4 330 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 GPR156Q8NFN8 814 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 OSCP1Q8WVF1 389 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 RSPRY1Q96DX4 576 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SLC29A3Q9BZD2 475 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SMURF2Q9HAU4 748 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 NTN4Q9HB63 628 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SMPD3Q9NY59 655 aaPredicted RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 CXCR6O00574 342 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 GNGT2O14610 69 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 NPPAP01160 153 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SLC6A11P48066 632 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 C6orf183Q5T699 404 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 HENMT1Q5T8I9 393 aaKnown RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 OR8J3Q8NGG0 315 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 FAM120BQ96EK7 910 aaKnown RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 BDH2Q9BUT1 245 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 CLK4Q9HAZ1 481 aaKnown RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 TBC1D14Q9P2M4 693 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 FAF1Q9UNN5 650 aaPredicted RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 PRKAB1Q9Y478 270 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 KCNE1BA0A087WTH5 132 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 GFYI3L273 518 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SLC16A8O95907 504 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 CYP17A1P05093 508 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 UMPSP11172 480 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 PRKACGP22612 351 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 CLCN2P51788 898 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 CAMK1Q14012 370 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 ZNF805Q5CZA5 627 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SPRED1Q7Z699 444 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 C2orf73Q8N5S3 287 aaPredicted RBP15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SLC8A2Q9UPR5 921 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 TSC22D4Q9Y3Q8 395 aa15.3■□□□□ 0.04
LRFN1-201ENST00000248668 SDK1Q7Z5N4 2213 aa15.29■□□□□ 0.04
LRFN1-201ENST00000248668 B4GAT1O43505 415 aa15.29■□□□□ 0.04
LRFN1-201ENST00000248668 CPSF4O95639 269 aaKnown RBP15.29■□□□□ 0.04
LRFN1-201ENST00000248668 ZNF30P17039 623 aa15.29■□□□□ 0.04
LRFN1-201ENST00000248668 TMEM115Q12893 351 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms