RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CFL2Q9Y281 166 aa19.4■□□□□ 0.7
SOX4-201ENST00000244745 A6NHS1 94 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 A8MV72 311 aaPredicted RBP19.39■□□□□ 0.7
SOX4-201ENST00000244745 MAGEB3O15480 346 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 WASP42768 502 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 GDF5P43026 501 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 CSTF1Q05048 431 aaKnown RBP19.39■□□□□ 0.7
SOX4-201ENST00000244745 TUBA3CQ13748 450 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 DUOXA1Q1HG43 343 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 SMOC2Q9H3U7 446 aa19.39■□□□□ 0.7
SOX4-201ENST00000244745 SLC15A1P46059 708 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 HNMTP50135 292 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 FKBP1BP68106 108 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 RPF2Q9H7B2 306 aaKnown RBP19.39■□□□□ 0.69
SOX4-201ENST00000244745 MANBAO00462 879 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 ANXA8P13928 327 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 XKP51811 444 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 NUDT6P53370 316 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 SLC10A2Q12908 348 aaPredicted RBP19.39■□□□□ 0.69
SOX4-201ENST00000244745 DSC3Q14574 896 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 VPS29Q9UBQ0 182 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 A0A1W2PRB8 838 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 LOC730098B7Z3J9 87 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 FAM72CH0Y354 149 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 FGF19O95750 216 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 ZNF24P17028 368 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 GMPRP36959 345 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 PGGT1BP53609 377 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 HEPACAMQ14CZ8 416 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 FAM72AQ5TYM5 149 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 FAM72DQ6L9T8 149 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 PSRC1Q6PGN9 363 aaPredicted RBP19.39■□□□□ 0.69
SOX4-201ENST00000244745 RTL4Q6ZR62 310 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 CHST15Q7LFX5 561 aaPredicted RBP19.39■□□□□ 0.69
SOX4-201ENST00000244745 FAM72BQ86X60 149 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 FUBP3Q96I24 572 aaKnown RBP eCLIP19.39■□□□□ 0.69
SOX4-201ENST00000244745 BIRC8Q96P09 236 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 MLXQ9UH92 298 aa19.39■□□□□ 0.69
SOX4-201ENST00000244745 CREG1O75629 220 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 KHKP50053 298 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 ATP4BP51164 291 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 LAPTM4AQ15012 233 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 CHRNA6Q15825 494 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 ALG11Q2TAA5 492 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 OXR1Q8N573 874 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 OR10H4Q8NGA5 316 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 ZUFSPQ96AP4 578 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 SLC32A1Q9H598 525 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 GKN1Q9NS71 199 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 EBF1Q9UH73 591 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 STX16O14662 325 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 SEPT4O43236 478 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 EOMESO95936 686 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 LAG3P18627 525 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 CLK3P49761 638 aaKnown RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 AGTR2P50052 363 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 UBXN11Q5T124 520 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 BEND7Q8N7W2 519 aaPredicted RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 CRELD1Q96HD1 420 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 PHPT1Q9NRX4 125 aaPredicted RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 RPL36Q9Y3U8 105 aaKnown RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 WWP2O00308 870 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 TSEN15Q8WW01 171 aaKnown RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 XYLT2Q9H1B5 865 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 TBC1D14Q9P2M4 693 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 SPIN1Q9Y657 262 aaPredicted RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 ILVBLA1L0T0 632 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 KLHL22Q53GT1 634 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 C2orf15Q8WU43 125 aaKnown RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 ZNF696Q9H7X3 374 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 PAK6Q9NQU5 681 aaPredicted RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 FLRT1Q9NZU1 646 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 RIMKLBQ9ULI2 386 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 A0A0J9YVX5 310 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 TLR4O00206 839 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 SCAMP1O15126 338 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 DNTTP04053 509 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 PLA2G16P53816 162 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 TSTQ16762 297 aaKnown RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 KLHL24Q6TFL4 600 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 FRRS1Q6ZNA5 592 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 AMIGO3Q86WK7 504 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 ZMIZ2Q8NF64 920 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 IL4I1Q96RQ9 567 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 POLR2J3Q9H1A7 115 aaKnown RBP19.38■□□□□ 0.69
SOX4-201ENST00000244745 KCNN2Q9H2S1 579 aa19.38■□□□□ 0.69
SOX4-201ENST00000244745 PHRF1Q9P1Y6 1649 aaKnown RBP19.37■□□□□ 0.69
SOX4-201ENST00000244745 PRNPP04156 253 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 ITPKBP27987 946 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 ARFIP1P53367 373 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 TMBIM6P55061 237 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 AP3S2P59780 193 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 TUBA1BP68363 451 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 MVKQ03426 396 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 TUBA1AQ71U36 451 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 FIZ1Q96SL8 496 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 TBX5Q99593 518 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 HERPUD2Q9BSE4 406 aa19.37■□□□□ 0.69
SOX4-201ENST00000244745 ZDHHC3Q9NYG2 299 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms