RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PIF1Q9H611 641 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 CNOT11Q9UKZ1 510 aaKnown RBP17.93■□□□□ 0.46
HOXC11-201ENST00000243082 SZT2Q5T011 3432 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 MGAT4DA6NG13 374 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 H0YIV9 168 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 SMNDC1O75940 238 aaKnown RBP eCLIP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 ACPPP15309 386 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 ZNF26P17031 533 aaPredicted RBP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 ACADLP28330 430 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 SOX11P35716 441 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 HNF4AP41235 474 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 OR4D2P58180 307 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 CSTF3Q12996 717 aaKnown RBP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 ADAM15Q13444 863 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 MED21Q13503 144 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 CAMK2GQ13555 558 aaPredicted RBP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 NFE2L1Q14494 772 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 INPP5AQ14642 412 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 TRMT11Q7Z4G4 463 aaKnown RBP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 AMIGO2Q86SJ2 522 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 MSRB3Q8IXL7 192 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 FCRL1Q96LA6 429 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 APOLD1Q96LR9 279 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 TSSK3Q96PN8 268 aa17.92■□□□□ 0.46
HOXC11-201ENST00000243082 TRMT61BQ9BVS5 477 aaKnown RBP17.92■□□□□ 0.46
HOXC11-201ENST00000243082 A6NHS1 94 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 AP1G1O43747 822 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 UBTFL6P0CB48 400 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 HRH2P25021 359 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 MAPK1P28482 360 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 OXTRP30559 389 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 GALK1P51570 392 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 CCR3P51677 355 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 PLOD1Q02809 727 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 E2F2Q14209 437 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 WSCD2Q2TBF2 565 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 MTX3Q5HYI7 312 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 NOXRED1Q6NXP6 359 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 FAM83HQ6ZRV2 1179 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 NUDT18Q6ZVK8 323 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 HM13Q8TCT9 377 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 OR52E6Q96RD3 313 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 DPEP2Q9H4A9 486 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 SPATA6Q9NWH7 488 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 SLC25A37Q9NYZ2 338 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 SERGEFQ9UGK8 458 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 AURKCQ9UQB9 309 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 PRKAB1Q9Y478 270 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 PCDHB3Q9Y5E6 796 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 LYNP07948 512 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 DLX2Q07687 328 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 TBCELQ5QJ74 424 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 CES5AQ6NT32 575 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 ERMP1Q7Z2K6 904 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 HEATR4Q86WZ0 1026 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 RIMKLAQ8IXN7 391 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 GALNT4Q8N4A0 578 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 EZH1Q92800 747 aaPredicted RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 NEIL2Q969S2 332 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 EME1Q96AY2 570 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 EGLN2Q96KS0 407 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 MTERF1Q99551 399 aaKnown RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 LGR4Q9BXB1 951 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 ZDHHC5Q9C0B5 715 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 RPF2Q9H7B2 306 aaKnown RBP17.91■□□□□ 0.46
HOXC11-201ENST00000243082 PPT2Q9UMR5 302 aa17.91■□□□□ 0.46
HOXC11-201ENST00000243082 K7EQS6 105 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 DENRO43583 198 aaKnown RBP17.9■□□□□ 0.46
HOXC11-201ENST00000243082 PCCBP05166 539 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 PSMA4P25789 261 aaKnown RBP17.9■□□□□ 0.46
HOXC11-201ENST00000243082 KIR2DL1P43626 348 aaPredicted RBP17.9■□□□□ 0.46
HOXC11-201ENST00000243082 TBPL1P62380 186 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 AASDHQ4L235 1098 aaPredicted RBP17.9■□□□□ 0.46
HOXC11-201ENST00000243082 SLCO4C1Q6ZQN7 724 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 PROSER1Q86XN7 944 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 FAM9CQ8IZT9 166 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 OR9A1PQ8NGU1 263 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 PPWD1Q96BP3 646 aaKnown RBP17.9■□□□□ 0.46
HOXC11-201ENST00000243082 TESCQ96BS2 214 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 ZNF583Q96ND8 569 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 HHIPQ96QV1 700 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 OR52A5Q9H2C5 316 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 COQ10BQ9H8M1 238 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 GPRC5BQ9NZH0 403 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 VPS29Q9UBQ0 182 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 RAB26Q9ULW5 256 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 KCNE2Q9Y6J6 123 aa17.9■□□□□ 0.46
HOXC11-201ENST00000243082 TRBV5-3A0A0A0MS03 114 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 HNRNPRO43390 633 aaKnown RBP17.89■□□□□ 0.46
HOXC11-201ENST00000243082 AKAP10O43572 662 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 PCDH8O95206 1070 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 GPIP06744 558 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 BMP2P12643 396 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 PCSK2P16519 638 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 NPPBP16860 134 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 IL10P22301 178 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 CDK3Q00526 305 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 CYP51A1Q16850 503 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms