RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PRSS56P0CW18 603 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 RALBP11234 206 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 ATP1B2P14415 290 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-201ENST00000242776 GABRA4P48169 554 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 CDKN1CP49918 316 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-201ENST00000242776 SOX8P57073 446 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 NAPRTQ6XQN6 538 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 UNC5AQ6ZN44 842 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 GDF7Q7Z4P5 450 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 LMNTD1Q8N9Z9 388 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 TFGQ92734 400 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-201ENST00000242776 LINC00615Q96LM1 132 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-201ENST00000242776 OR2A14Q96R47 310 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 TRIM31Q9BZY9 425 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 ETNK1Q9HBU6 452 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 EIF2B3Q9NR50 452 aaKnown RBP13.25□□□□□ -0.29
DDX39A-201ENST00000242776 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-201ENST00000242776 PCNX1Q96RV3 2341 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 C2orf81A6NN90 581 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 ISM1B1AKI9 464 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 SMAPO00193 183 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 DNALI1O14645 258 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-201ENST00000242776 KLHL18O94889 574 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 METTL18O95568 372 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 COX6B1P14854 86 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 HTR1EP28566 365 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
DDX39A-201ENST00000242776 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 TLR1Q15399 786 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 PRSS58Q8IYP2 241 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 TAB3Q8N5C8 712 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-201ENST00000242776 C2orf73Q8N5S3 287 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-201ENST00000242776 BCORP1Q8N888 145 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 ITLN2Q8WWU7 325 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-201ENST00000242776 COPS8Q99627 209 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 MVB12BQ9H7P6 319 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 PLA2G3Q9NZ20 509 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 HS3ST3B1Q9Y662 390 aa13.24□□□□□ -0.29
DDX39A-201ENST00000242776 A0A0J9YY10 115 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 KLHL33A6NCF5 533 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 AP2A1O95782 977 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 EPOP01588 193 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 APRTP07741 180 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CHRM5P08912 532 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CD63P08962 238 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TPSB2P20231 275 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 ITGAXP20702 1163 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MMP11P24347 488 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MCM3P25205 808 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MRPS25P82663 173 aaKnown RBP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 XIAPP98170 497 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CDK16Q00536 496 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 SLC7A5Q01650 507 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 GUCY2DQ02846 1103 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 Q0VFX4 171 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TAF1AQ15573 450 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TPSAB1Q15661 275 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 RBBP7Q16576 425 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TUBB8Q3ZCM7 444 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 ZNF449Q6P9G9 518 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 GFRALQ6UXV0 394 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MRGPRGQ86SM5 289 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 LINC00523Q86TU6 105 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 KLHDC8BQ8IXV7 354 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 PPIL6Q8IXY8 311 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 DTWD1Q8N5C7 304 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CLDN19Q8N6F1 224 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 LRRN4CLQ8ND94 238 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 LHPPQ9H008 270 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 FAM114A2Q9NRY5 505 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 WHRNQ9P202 907 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CIDEBQ9UHD4 219 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 ASF1AQ9Y294 204 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 HEATR9A2RTY3 570 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CFAP99D6REC4 459 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 AP3B1O00203 1094 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CCL21O00585 134 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 DIAPH2O60879 1101 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 SEC31AO94979 1220 aaKnown RBP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 RHOXF2BP0C7M4 288 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 HIVEP1P15822 2718 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 ITGALP20701 1170 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MAGEA6P43360 314 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 ARG2P78540 354 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CAV1Q03135 178 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 KCNJ11Q14654 390 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MORF4L2Q15014 288 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TLDC1Q6P9B6 456 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 IGFL2Q6UWQ7 119 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 PPP1R21Q6ZMI0 780 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TAS2R42Q7RTR8 314 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TAX1BP1Q86VP1 789 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 DNAJC22Q8N4W6 341 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms