RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 KPNA2P52292 529 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 ZZZ3Q8IYH5 903 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CCDC115Q96NT0 180 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 MARVELD1Q9BSK0 173 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 PSORS1C1Q9UIG5 152 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 GABRQQ9UN88 632 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 TRAV19A0A0A6YYK7 116 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 WWP2O00308 870 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 PCDHGA12O60330 932 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CSKP41240 450 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CLCN4P51793 760 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 DSC1Q08554 894 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 MXD4Q14582 209 aaPredicted RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 FAM131AQ6UXB0 335 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SNX20Q7Z614 316 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SLC37A3Q8NCC5 494 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SRFBP1Q8NEF9 429 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 LPPQ93052 612 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 LGMNQ99538 433 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CLEC4MQ9H2X3 399 aaPredicted RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 RBFOX1Q9NWB1 397 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 KIF25Q9UIL4 384 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SLC30A4O14863 429 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 MUSKO15146 869 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 MDM4O15151 490 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 PLOD3O60568 738 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 TSPAN8P19075 237 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CASP2P42575 452 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CAPZA2P47755 286 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 DAPP51397 102 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 PLK1P53350 603 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 CRISP3P54108 245 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 TP53BP2Q13625 1128 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 ZNF124Q15973 351 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 GPR33Q49SQ1 333 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 ERFEQ4G0M1 354 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 RTL4Q6ZR62 310 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 OR11H4Q8NGC9 324 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 UPRTQ96BW1 309 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
MSH2-201ENST00000233146 OLA1Q9NTK5 396 aaKnown RBP12.7□□□□□ -0.38
MSH2-201ENST00000233146 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 PIP5K1BO14986 540 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 HGFP14210 728 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
MSH2-201ENST00000233146 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
MSH2-201ENST00000233146 DIO3P55073 304 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 NFIAQ12857 509 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 SPP2Q13103 211 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 LRRC8DQ7L1W4 858 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 TTC29Q8NA56 475 aaPredicted RBP12.69□□□□□ -0.38
MSH2-201ENST00000233146 OR52N1Q8NH53 320 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 PHF21BQ96EK2 531 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 CELF6Q96J87 481 aaKnown RBP12.69□□□□□ -0.38
MSH2-201ENST00000233146 P2RY13Q9BPV8 354 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 NIF3L1Q9GZT8 377 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 ZFR2Q9UPR6 939 aaKnown RBP12.69□□□□□ -0.38
MSH2-201ENST00000233146 CMAHPQ9Y471 501 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 CLCA3PQ9Y6N3 262 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 A0A087X1B8 175 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 FAM170BA6NMN3 283 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 FZD9O00144 591 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 MED7O43513 233 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 GREM1O60565 184 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
MSH2-201ENST00000233146 FABP1P07148 127 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 CD19P15391 556 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 EPHA2P29317 976 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 CREMQ03060 361 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 ADAM15Q13444 863 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 WSCD2Q2TBF2 565 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 GPR152Q8TDT2 470 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 MYDGFQ969H8 173 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 ADAM30Q9UKF2 790 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 ROBO1Q9Y6N7 1651 aa12.69□□□□□ -0.38
MSH2-201ENST00000233146 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 K7ERI5 159 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 ITGB1P05556 798 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 NPR1P16066 1061 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 HOXA9P31269 272 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CAMK1Q14012 370 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 TSC22D1Q15714 1073 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 TIMM50Q3ZCQ8 353 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 LCN1P1Q5VSP4 162 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 MS4A15Q8N5U1 240 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CEP76Q8TAP6 659 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 KIAA1191Q96A73 305 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 ZNF583Q96ND8 569 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 BARD1Q99728 777 aaKnown RBP12.68□□□□□ -0.38
MSH2-201ENST00000233146 DPYSL5Q9BPU6 564 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms