RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CARS2Q9HA77 564 aaKnown RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 DCAF13Q9NV06 445 aaKnown RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 TNPO3Q9Y5L0 923 aaKnown RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 A3GALT2U3KPV4 340 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 TRBV5-3A0A0A0MS03 114 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 CCL22O00626 93 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 FKBP9O95302 570 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 DCTP40126 519 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 MAPKAPK2P49137 400 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ITKQ08881 620 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 CDK5R2Q13319 367 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ATG9BQ674R7 924 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 SLCO6A1Q86UG4 719 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 PNPLA1Q8N8W4 532 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 NXPE3Q969Y0 559 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 SLC47A1Q96FL8 570 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ZFYVE19Q96K21 471 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 PPP3R2Q96LZ3 170 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 BTBD2Q9BX70 525 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ACTR8Q9H981 624 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 CCNB1IP1Q9NPC3 277 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 TMEFF2Q9UIK5 374 aaPredicted RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 INTS6Q9UL03 887 aaKnown RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 CDC7O00311 574 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 PRAMEF11O60813 436 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 IGLV3-27P01718 113 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 CORO1AP31146 461 aaKnown RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 KPNA1P52294 538 aaPredicted RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 SLC35A2P78381 396 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 EMX1Q04741 257 aaPredicted RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 FCHO2Q0JRZ9 810 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 MAD2L1Q13257 205 aaPredicted RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 NKG7Q16617 165 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 MS4A13Q5J8X5 152 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 CAPN13Q6MZZ7 669 aaPredicted RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 UGT3A1Q6NUS8 523 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 RALGPS2Q86X27 583 aaPredicted RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 CALHM3Q86XJ0 350 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 DCP2Q8IU60 420 aaKnown RBP20.03■□□□□ 0.8
SNX3-201ENST00000230085 CHPFQ8IZ52 775 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 GJD3Q8N144 294 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 SGCDQ92629 289 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ASIC4Q96FT7 647 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 PPM1MQ96MI6 270 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 LINC00597Q9H2U6 94 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 TPRKBQ9Y3C4 175 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 CCL27Q9Y4X3 112 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ARL5AQ9Y689 179 aa20.03■□□□□ 0.8
SNX3-201ENST00000230085 ELOVL7A1L3X0 281 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 FAM220BPB1ANY3 271 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 PFDN6O15212 129 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 VPS26AO75436 327 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 INMTO95050 263 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 TPD52P55327 224 aaPredicted RBP20.02■□□□□ 0.8
SNX3-201ENST00000230085 MTPNP58546 118 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 IFITM3Q01628 133 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 METTL2BQ6P1Q9 378 aaKnown RBP20.02■□□□□ 0.8
SNX3-201ENST00000230085 HTR3DQ70Z44 454 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 BTLAQ7Z6A9 289 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 DENND1CQ8IV53 801 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 BBS7Q8IWZ6 715 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 OR13C4Q8NGS5 318 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 SLC13A3Q8WWT9 602 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 STARD8Q92502 1023 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 RORBQ92753 470 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 GTF2H4Q92759 462 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 KCNJ9Q92806 393 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 PLD4Q96BZ4 506 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 CTRCQ99895 268 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 SEMA3CQ99985 751 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 TRMT61BQ9BVS5 477 aaKnown RBP20.02■□□□□ 0.8
SNX3-201ENST00000230085 EPS8L2Q9H6S3 715 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 SMURF2Q9HAU4 748 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 PDFQ9HBH1 243 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 ARIH1Q9Y4X5 557 aaPredicted RBP20.02■□□□□ 0.8
SNX3-201ENST00000230085 MAGED1Q9Y5V3 778 aaPredicted RBP20.02■□□□□ 0.8
SNX3-201ENST00000230085 WNT6Q9Y6F9 365 aa20.02■□□□□ 0.8
SNX3-201ENST00000230085 MN1Q10571 1320 aaPredicted RBP20.02■□□□□ 0.79
SNX3-201ENST00000230085 RECQL5O94762 991 aaPredicted RBP20.01■□□□□ 0.79
SNX3-201ENST00000230085 NFKBIAP25963 317 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 GDI1P31150 447 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 AKT1P31749 480 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 HK3P52790 923 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 PPP5CP53041 499 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 ERVPABLB-1P60509 514 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 RING1Q06587 406 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 CYP4F3Q08477 520 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 TAF1AQ15573 450 aaPredicted RBP20.01■□□□□ 0.79
SNX3-201ENST00000230085 RBBP7Q16576 425 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 IMPG1Q17R60 797 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 ADPRMQ3LIE5 342 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 RUNDC3AQ59EK9 446 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 SHQ1Q6PI26 577 aaKnown RBP20.01■□□□□ 0.79
SNX3-201ENST00000230085 GPSM1Q86YR5 675 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 SVOPQ8N4V2 548 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 ZFP90Q8TF47 636 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 NSMCE3Q96MG7 304 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 SIGLEC11Q96RL6 698 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 VAPAQ9P0L0 249 aa20.01■□□□□ 0.79
SNX3-201ENST00000230085 GALPQ9UBC7 116 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms