RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 CSRP2Q16527 193 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 PHKG1Q16816 387 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 AP5B1Q2VPB7 878 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 FBXO43Q4G163 708 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 CACHD1Q5VU97 1274 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 LETMD1Q6P1Q0 360 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 NEK5Q6P3R8 708 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 TMEM220Q6QAJ8 160 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 PAOXQ6QHF9 649 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 LRRC74BQ6ZQY2 392 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 MSANTD1Q6ZTZ1 278 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 RPS27LQ71UM5 84 aaKnown RBP10.37□□□□□ -0.75
CDCA3-201ENST00000229265 FKBP9P1Q75LS8 142 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 HID1Q8IV36 788 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 AQP12AQ8IXF9 295 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 CDYL2Q8N8U2 506 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 LKAAEAR1Q8TD35 194 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 SLC26A7Q8TE54 656 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 CXorf40AQ8TE69 158 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 DNAJC9Q8WXX5 260 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 STARD8Q92502 1023 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 LRRC58Q96CX6 371 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 NUS1Q96E22 293 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 CMTM7Q96FZ5 175 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 NAF1Q96HR8 494 aaKnown RBP10.37□□□□□ -0.75
CDCA3-201ENST00000229265 CLPTM1LQ96KA5 538 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 ZBTB18Q99592 522 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 TMEM79Q9BSE2 394 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 TRIM15Q9C019 465 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 RSPH9Q9H1X1 276 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-201ENST00000229265 RMI1Q9H9A7 625 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 BRF2Q9HAW0 419 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 PRSS16Q9NQE7 514 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 C8orf4Q9NR00 106 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 ACSS2Q9NR19 701 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 DNAJC11Q9NVH1 559 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 C1orf109Q9NX04 203 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 G3BP2Q9UN86 482 aaKnown RBP10.37□□□□□ -0.75
CDCA3-201ENST00000229265 TIMM22Q9Y584 194 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 FADS3Q9Y5Q0 445 aa10.37□□□□□ -0.75
CDCA3-201ENST00000229265 CACNA1EQ15878 2313 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 TP53BP1Q12888 1972 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 LNP1A1A4G5 178 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 CCDC154A6NI56 674 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 FADS2P1A8MWK0 482 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 H0YIV9 168 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 MANBAO00462 879 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 KRT36O76013 467 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 GUCA1CO95843 209 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 HOXC4P09017 264 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 JUPP14923 745 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 MAOBP27338 520 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 PRDX3P30048 256 aaKnown RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 GPR1P46091 355 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 CLNS1AP54105 237 aaKnown RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 LRRC74AQ0VAA2 488 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 CSTF3Q12996 717 aaKnown RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 LAPTM5Q13571 262 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 CEACAM7Q14002 265 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 CCNIQ14094 377 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 FLOT2Q14254 428 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ARHGAP19Q14CB8 494 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 TLR1Q15399 786 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ZNF658BQ4V348 819 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 TLDC1Q6P9B6 456 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 UNC5DQ6UXZ4 953 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 TRMT11Q7Z4G4 463 aaKnown RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ZFAND4Q86XD8 727 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 PROSER1Q86XN7 944 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 PTRH1Q86Y79 214 aaKnown RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 APLFQ8IW19 511 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 SFRP1Q8N474 314 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 CAMKK1Q8N5S9 505 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 BEND7Q8N7W2 519 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-201ENST00000229265 RASGEF1AQ8N9B8 481 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 FNDC5Q8NAU1 212 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ADCY4Q8NFM4 1077 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 TNIP2Q8NFZ5 429 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 OR52B6Q8NGF0 335 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 OR2L2Q8NH16 312 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 OR56A3Q8NH54 315 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 PROKR1Q8TCW9 393 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 FAM131CQ96AQ9 280 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ARRDC3Q96B67 414 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 REPS1Q96D71 796 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 COX14Q96I36 57 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 HIC2Q96JB3 615 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 MRGPRX1Q96LB2 322 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 NPAS2Q99743 824 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 GABRG3Q99928 467 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 EHD1Q9H4M9 534 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ACTR8Q9H981 624 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ITM2CQ9NQX7 267 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 SIRT5Q9NXA8 310 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 ADGRE2Q9UHX3 823 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 PPT2Q9UMR5 302 aa10.36□□□□□ -0.75
CDCA3-201ENST00000229265 PCDHGA11Q9Y5H2 935 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms