RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 TBC1D3BA6NDS4 549 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MANSC4A6NHS7 340 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 M0R129 80 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 BCAS1O75363 584 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 HTR7P34969 479 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MAGEA3P43357 314 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 RELAQ04206 551 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 UPP1Q16831 310 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 ZNF404Q494X3 552 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 PKDCCQ504Y2 493 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 FNDC3BQ53EP0 1204 aaKnown RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 CRTC2Q53ET0 693 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 AP2M1Q96CW1 435 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 HEPHQ9BQS7 1158 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 OR51B5Q9H339 312 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 TMEM181Q9P2C4 612 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 TMX2-CTNND1H3BSU7 103 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 CH25HO95992 272 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 FYNP06241 537 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 BCKDHAP12694 445 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 DNAJA1P31689 397 aaKnown RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 NSG1P42857 185 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 TARDBPQ13148 414 aaKnown RBP eCLIP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 ADGRF1Q5T601 910 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 ARHGAP12Q8IWW6 846 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 CHERPQ8IWX8 916 aaKnown RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 SCML4Q8N228 414 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 STARD8Q92502 1023 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MAL2Q969L2 176 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 TADA1Q96BN2 335 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 REPS1Q96D71 796 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 ZNF641Q96N77 438 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 NPLQ9BXD5 320 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 SP140LQ9H930 580 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 SDR39U1Q9NRG7 319 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 UCKL1Q9NWZ5 548 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 VPS29Q9UBQ0 182 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MANBAO00462 879 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 PRAMEF11O60813 436 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 CYP2A6P11509 494 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 MYF6P23409 242 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 NHSL2Q5HYW2 709 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 GCNT6Q5T4J0 391 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 C9orf64Q5T6V5 341 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 KIAA0319Q5VV43 1072 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 CMTM8Q8IZV2 173 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 TBX5Q99593 518 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 RAD18Q9NS91 495 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 IMP3Q9NV31 184 aaKnown RBP13.4□□□□□ -0.26
NFKB1-201ENST00000226574 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 GJD2Q9UKL4 321 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 PCDHGB3Q9Y5G1 929 aa13.4□□□□□ -0.26
NFKB1-201ENST00000226574 ADAMDEC1O15204 470 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PDE9AO76083 593 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SSR2P43308 183 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SMN1Q16637 294 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ANXA8L1Q5VT79 327 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM220Q6QAJ8 160 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF420Q8TAQ5 688 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM125Q96AQ2 219 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 CLIP3Q96DZ5 547 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 FABP12A6NFH5 140 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SLC1A7O00341 560 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 S100A1P23297 94 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PREPP48147 710 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 RPP38P78345 283 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SCAPQ12770 1279 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 IFI44LQ53G44 452 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SUSD1Q6UWL2 747 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TRIM63Q969Q1 353 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 Q96MT0 163 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ACOT8O14734 319 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SMIM18P0DKX4 95 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 GJA8P48165 433 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 CCR4P51679 360 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TXNL4AP83876 142 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 STX4Q12846 297 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PON2Q15165 354 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 MARCH8Q5T0T0 291 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 DCST1Q5T197 706 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 LCN8Q6JVE9 175 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 CAPN13Q6MZZ7 669 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ERICH5Q6P6B1 374 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 C16orf62Q7Z3J2 963 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 HDDC2Q7Z4H3 204 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 RAB8BQ92930 207 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms