RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 KRT84Q9NSB2 600 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 C1orf109Q9NX04 203 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 USE1Q9NZ43 259 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 GOLGA4Q13439 2230 aaKnown RBP20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 DOCK3Q8IZD9 2030 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 CCL15-CCL14A0A0B4J2E2 113 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 RFPL2O75678 378 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 PRKACAP17612 351 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 WEE1P30291 646 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 CCL15Q16663 113 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 LRIT3Q3SXY7 679 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 C7orf57Q8NEG2 295 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 OR52J3Q8NH60 311 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 PMEPA1Q969W9 287 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 SEPT5Q99719 369 aaPredicted RBP20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 MRPL9Q9BYD2 267 aaKnown RBP20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 RMND5AQ9H871 391 aa20.12■□□□□ 0.81
PHOX2B-201ENST00000226382 ARNTLO00327 626 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 ALPIP09923 528 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 TNFRSF1BP20333 461 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 CA5AP35218 305 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 VLDLRP98155 873 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 TAF10Q12962 218 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 CCDC71Q8IV32 467 aaPredicted RBP20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 ZNF683Q8IZ20 524 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 TEX26Q8N6G2 289 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 ATP6V0D2Q8N8Y2 350 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 LKAAEAR1Q8TD35 194 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 TRIM62Q9BVG3 475 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 LRTM1Q9HBL6 345 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 NECTIN3Q9NQS3 549 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 SIRT5Q9NXA8 310 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 PCDHGA12O60330 932 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 ARHGDIAP52565 204 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 CYP27C1Q4G0S4 372 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 CACHD1Q5VU97 1274 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 PDE12Q6L8Q7 609 aaKnown RBP20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 ZNF551Q7Z340 670 aaPredicted RBP20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 MON1AQ86VX9 555 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 DNASE1L2Q92874 299 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 SLC39A13Q96H72 371 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 POPDC3Q9HBV1 291 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 PRAMEF11O60813 436 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 UPK1BO75841 260 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 SCELO95171 688 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 CPSF4O95639 269 aaKnown RBP20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 KIAA0040Q15053 153 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 ZNF404Q494X3 552 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 CD300LGQ6UXG3 332 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 HIPK1Q86Z02 1210 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 P3H2Q8IVL5 708 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 RDH12Q96NR8 316 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 OR51E2Q9H255 320 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 OPTCQ9UBM4 332 aa20.11■□□□□ 0.81
PHOX2B-201ENST00000226382 RALGAPA2Q2PPJ7 1873 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 TAF4O00268 1085 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 AP3D1O14617 1153 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 CCNKO75909 580 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 OTCP00480 354 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 BCKDHAP12694 445 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 LPOP22079 712 aaPredicted RBP20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 GRK5P34947 590 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 BMPR1AP36894 532 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 GNPDA1P46926 289 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 PCBP1Q15365 356 aaKnown RBP eCLIP20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 RUNDC3AQ59EK9 446 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 NADSYN1Q6IA69 706 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 OR4F3Q6IEY1 312 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 CCBE1Q6UXH8 406 aaPredicted RBP20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 KCNS3Q9BQ31 491 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 FBXO8Q9NRD0 319 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 SNX6Q9UNH7 406 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 RAI2Q9Y5P3 530 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 NPPAP01160 153 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 S100A3P33764 101 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 MRPS6P82932 125 aaKnown RBP20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 FAM214AQ32MH5 1076 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 ZNF280BQ86YH2 543 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 ELMOD2Q8IZ81 293 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 RUBCNLQ9H714 662 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 ERVK13-1Q9NX77 482 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 PCDHB9Q9Y5E1 797 aa20.1■□□□□ 0.81
PHOX2B-201ENST00000226382 H3BUI4 141 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 RGS14O43566 566 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 PRLP01236 227 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 NTRK1P04629 796 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 HOXB8P17481 243 aaPredicted RBP20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 RPP38P78345 283 aaKnown RBP20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 ACOX1Q15067 660 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 TPRG1LQ5T0D9 272 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 FAM171A1Q5VUB5 890 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 OR2T5Q6IEZ7 315 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 SBSNQ6UWP8 590 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 ZNF621Q6ZSS3 439 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 CYP2U1Q7Z449 544 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 GPR149Q86SP6 731 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 NLGN4XQ8N0W4 816 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 GALNT6Q8NCL4 622 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 SETD9Q8NE22 299 aa20.09■□□□□ 0.81
PHOX2B-201ENST00000226382 OR2T29Q8NH02 315 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms