RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 DENND4CQ5VZ89 1909 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 OTOL1A6NHN0 477 aaPredicted RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 BCAS2O75934 225 aaPredicted RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 OTCP00480 354 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CAPNS1P04632 268 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 S100A6P06703 90 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 RPS17P08708 135 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PSMA3P25788 255 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SOX11P35716 441 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CBX5P45973 191 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PSMD8P48556 350 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 METAP1P53582 386 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CDKL1Q00532 357 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ATP6AP1LQ52LC2 224 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ATAT1Q5SQI0 421 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CES5AQ6NT32 575 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SBSNQ6UWP8 590 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PARS2Q7L3T8 475 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CPSF7Q8N684 471 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 OR4F6Q8NGB9 312 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM159Q96B96 161 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PYCR2Q96C36 320 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SLC25A23Q9BV35 468 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CAAP1Q9H8G2 361 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 FANCEQ9HB96 536 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 NEK6Q9HC98 313 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CACNA2D2Q9NY47 1150 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PRKAB1Q9Y478 270 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 MYOCOSA0A1B0GUC4 107 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 PRSS51A0A1B0GVH4 220 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 E2F3O00716 465 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 WNT9AO14904 365 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 TSPAN6O43657 245 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 FGF4P08620 206 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 GDI1P31150 447 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 GPR1P46091 355 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 PLIN5Q00G26 463 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 NFE2L1Q14494 772 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF234Q14588 700 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 CPSF6Q16630 551 aaKnown RBP eCLIP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 KANK2Q63ZY3 851 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 LARP4Q71RC2 724 aaKnown RBP eCLIP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 TRAPPC5Q8IUR0 188 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 SFTPA1Q8IWL2 248 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 FAM9CQ8IZT9 166 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 LILRA2Q8N149 483 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 CPA6Q8N4T0 437 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 PCYOX1LQ8NBM8 494 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 FAM156AQ8NDB6 213 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 LILRB4Q8NHJ6 448 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 COQ7Q99807 217 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 DHRS9Q9BPW9 319 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 NEURL2Q9BR09 285 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 ATG10Q9H0Y0 220 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 SARDHQ9UL12 918 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 RBMX2Q9Y388 322 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 PIKFYVEQ9Y2I7 2098 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 C5orf42Q9H799 3197 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 TRBV5-4A0A0C4DH59 114 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 RTCAO00442 366 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 LINC01565O15544 149 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 HOXC11O43248 304 aaPredicted RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 MMP20O60882 483 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 STK16O75716 305 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 FTH1P02794 183 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 CISD3P0C7P0 127 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 MTHFD1P11586 935 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 M6PRP20645 277 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 DIO3P55073 304 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 KCNK10P57789 538 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 ERVPABLB-1P60509 514 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 TXNL4AP83876 142 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 MS4A2Q01362 244 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 VPS26BQ4G0F5 336 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 SULT1C3Q6IMI6 304 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 AADATQ8N5Z0 425 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 MCOLN3Q8TDD5 553 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 PPP1R16AQ96I34 528 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 SLC45A3Q96JT2 553 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 ZSCAN5AQ9BUG6 496 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 TUBB1Q9H4B7 451 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 FARSBQ9NSD9 589 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 OARD1Q9Y530 152 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 ATG2BQ96BY7 2078 aa8.68□□□□□ -1.02
MTHFD1-201ENST00000216605 EDDM13A0A1B0GTR0 161 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 NRP2O60462 931 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 VPS4BO75351 444 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 WDR47O94967 919 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PCDH8O95206 1070 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 SLC2A4P14672 509 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CYP2A7P20853 494 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CDH3P22223 829 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ALDH3B2P48448 385 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 IST1P53990 364 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PSME3P61289 254 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 B4GALNT1Q00973 533 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms