RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 SDHDO14521 159 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 HGSO14964 777 aaPredicted RBP15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 CASP2P42575 452 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 CTSKP43235 329 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 IRF8Q02556 426 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 CHIT1Q13231 466 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 KIF19Q2TAC6 998 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 THEMIS2Q5TEJ8 643 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 PRAMEF13Q5VWM6 474 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 LIPJQ5W064 366 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 LCTLQ6UWM7 567 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 ACAD11Q709F0 780 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 MTDHQ86UE4 582 aaKnown RBP15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 ALYREFQ86V81 257 aaKnown RBP15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 MYLK4Q86YV6 388 aaPredicted RBP15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 SYT12Q8IV01 421 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 TRIM48Q8IWZ4 208 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 SFRP1Q8N474 314 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 ZDHHC1Q8WTX9 485 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 NEIL2Q969S2 332 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 LRRC37BQ96QE4 947 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 OR52B2Q96RD2 323 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 CCT7Q99832 543 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 HAUS8Q9BT25 410 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 CCDC28BQ9BUN5 200 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 SLC29A3Q9BZD2 475 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 PCBD2Q9H0N5 130 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 TCF7L2Q9NQB0 619 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 POT1Q9NUX5 634 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 CPNE7Q9UBL6 633 aa15.42■□□□□ 0.06
SNRPD3-201ENST00000215829 A0A1W2PPV9 198 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 CCT8L1PA6NM43 557 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PIP5K1BO14986 540 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 YY2O15391 372 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 AQP9O43315 295 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 VIPP01282 170 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 HMOX2P30519 316 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 UBE2IP63279 158 aaKnown RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 IFT88Q13099 833 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 E2F2Q14209 437 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 TBCCQ15814 346 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 LSM12Q3MHD2 195 aaKnown RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 XKR6Q5GH73 641 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 TCHHL1Q5QJ38 904 aaPredicted RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PEAR1Q5VY43 1037 aaPredicted RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 DDIASQ8IXT1 998 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 ZNF548Q8NEK5 533 aaPredicted RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 ACTRT2Q8TDY3 377 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 LCN9Q8WX39 176 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PATE1Q8WXA2 126 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PIGKQ92643 395 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SH3KBP1Q96B97 665 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PFDN4Q9NQP4 134 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 DOLKQ9UPQ8 538 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SNX11Q9Y5W9 270 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 TP53BP1Q12888 1972 aaPredicted RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 DNAH14Q0VDD8 3507 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 KCNE1BA0A087WTH5 132 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PIAS2O75928 621 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 LINC00032P0C843 101 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 JUPP14923 745 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SHMT2P34897 504 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 BNC1Q01954 994 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 DOC2AQ14183 400 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SIM2Q14190 667 aaPredicted RBP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 CPSF6Q16630 551 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 METTL21CQ5VZV1 264 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SLCO4C1Q6ZQN7 724 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SLC9B2Q86UD5 537 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 AMIGO1Q86WK6 493 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SFTPA2Q8IWL1 248 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 FITM2Q8N6M3 262 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SLC37A2Q8TED4 501 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 SLC5A11Q8WWX8 675 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 C3orf30Q96M34 536 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 OR6C2Q9NZP2 312 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 BTRCQ9Y297 605 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 PCDHGA2Q9Y5H1 932 aa15.41■□□□□ 0.06
SNRPD3-201ENST00000215829 LMO7DNF2Z398 122 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 CCDC22O60826 627 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 ULK1O75385 1050 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 HOXD12P35452 270 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 HNF4AP41235 474 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 IL27RAQ6UWB1 636 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 RNF165Q6ZSG1 346 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 OR4E2Q8NGC2 313 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 CEP70Q8NHQ1 597 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 CCT6BQ92526 530 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 WDR34Q96EX3 536 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 EHD1Q9H4M9 534 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 TAC3Q9UHF0 121 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 SNX6Q9UNH7 406 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 SH2B3Q9UQQ2 575 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 PTGDR2Q9Y5Y4 395 aa15.4■□□□□ 0.06
SNRPD3-201ENST00000215829 B4DGG1 531 aa15.39■□□□□ 0.05
SNRPD3-201ENST00000215829 MANBAO00462 879 aa15.39■□□□□ 0.05
SNRPD3-201ENST00000215829 FFAR3O14843 346 aa15.39■□□□□ 0.05
SNRPD3-201ENST00000215829 GPR42O15529 346 aa15.39■□□□□ 0.05
SNRPD3-201ENST00000215829 VPS4BO75351 444 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms